Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04097 ATGGAACAAGAAGAAGAACCACAACAAAATGAGCCACCTCACTCTCACTCTCAATCTCGGTGCGTGACGCTACCTCCCGGTTGCCGGTTCCATCCTTCGGAGGAGCTTCTATTGAGTTACTACCTCACCAACAAAAATGGCACGGGGAACTGGAATGGTAACGGTGGTTTGGGATTCGATGGTTCTGATTTGATTCGGGAGCTGGATTTTTACGATTACGATCCTTTTGAACTTCCGGATTTTGCGTGCTTTGCGTACGGCTACGGCGGGAGGAGGAGGCACTGGTACTGTTTCACCACCGTTAGGGTTTCGAGGGGAGAGAGGTGGAAGAGGAAGAGGAAGGTTAAGAGTGGGTTCTGGTTGAAGAGGGGAAGGGTTTCGAATGTTAACGGTGTTGGGGAGAACGTGGTTTTGGGAACGAGGACAAGGTTCGTTTTCTATATGGGTGATTCGGCGAAGAACGGTGCCAGGACGGATTGGGTTTTGTATGAATACGCATTGGTTGATCATGTTATGGCCTCTTTTGTTCTTTGCCGGGTATTTAGTAAGCCTCGTTATAAGAATAGTGCATCAGACATCGGCCTGAGTTGTTGTGCAGAAGAGAGTGTATCAGCAGTGCGCCATATTGGTATTCAGCATGATGAACATGTTAAATTGGATGCCGTTGAAGCTAAAGTATGTGATGATATCTCCATTGACCACAACAATGAAATATGTGCTGGTGGAAACAGCGATAATCAAGTTAAGAATGCACATGACATAGATGCTTTACGATGTTTGGCGGCTCCTCAGGGCAGTCAGCAGGAAAGGCTTCCTTTACTCCCCAGCGGTAGTACAATGTTCATTGAAGCAATTTCATCTCAACAACAATTACTTTCCATCACGGAGGAAGACTTCATAGAGTTGAATGATCTTACATGA 921 0.4625 MEQEEEPQQNEPPHSHSQSRCVTLPPGCRFHPSEELLLSYYLTNKNGTGNWNGNGGLGFDGSDLIRELDFYDYDPFELPDFACFAYGYGGRRRHWYCFTTVRVSRGERWKRKRKVKSGFWLKRGRVSNVNGVGENVVLGTRTRFVFYMGDSAKNGARTDWVLYEYALVDHVMASFVLCRVFSKPRYKNSASDIGLSCCAEESVSAVRHIGIQHDEHVKLDAVEAKVCDDISIDHNNEICAGGNSDNQVKNAHDIDALRCLAAPQGSQQERLPLLPSGSTMFIEAISSQQQLLSITEEDFIELNDLT 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04097 306 MobiDBLite consensus disorder prediction 1 21 - -
Arst6g04097 306 Gene3D NAC domain 33 187 IPR036093 GO:0003677|GO:0006355
Arst6g04097 306 Pfam No apical meristem (NAM) protein 25 167 IPR003441 GO:0003677|GO:0006355
Arst6g04097 306 ProSiteProfiles NAC domain profile. 24 183 IPR003441 GO:0003677|GO:0006355
Arst6g04097 306 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 24 210 - -
Arst6g04097 306 SUPERFAMILY NAC domain 20 183 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04097 Arst-Chr6 109113808 109117969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04097 23 184 NAC Transcription Factor Family AT1G71930 31.737 6.92e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst6g04097 NAM 1.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04097 - - adu:107495754 515.768