Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04095 ATGGAACAAGAAGAAGAACCACAACAAAATGAGCCACCTCACTCTCACTCTCAATCTCGGTGCGTGACGCTACCTCCCGGTTGCCGGTTCCATCCTTCGGAGGAGCTTCTATTGAGTTACTACCTCACCAACAAAAATGGCACGGGGAACTGGAATGGTAACGGTGGTTTGGGATTCGATGGTTCTGATTTGATTCGGGAGCTGGATTTTTACGATTACGATCCTTTTGAACTTCCGGATTTTGCGTGCTTTGCGTACGGCTACGGCGGGAGGAGGAGGCACTGGTACTGTTTCACCACCGTTAGGGTTTCGAGGGGAGAGAGGTGGAAGAGGAAGAGGAAGGTTAAGAGTGGGTTCTGGTTGAAGAGGGGAAGGGTTTCGAATGTTAACGGTGTTGGGGAGAACGTGGTTTTGGGAACGAGGACAAGGTTCGTTTTCTATATGGGTGATTCGGCGAAGAACGGTGCCAGGACGGATTGGGTTTTGTATGAATACGCATTGGTTGATCATGTTATGGCCTCTTTTGTTCTTTGCCGGGTATTTAGTAAGCCTCGTTATAAGAATAGTGCATCAGACATCGGCCTGAGTTGTTGTGCAGAAGAGAGTGTATCAGCAGTGCGCCATATTGGTATTCAGCATGATGAACATGTTAAATTGGATGCCGTTGAAGCTAAAGTATGTGATGATATCTCCATTGACCACAACAATGAAATATGTGCTGGTGGAAACAGCGATAATCAAGTTAAGAATGCACATGACATAGATGCTTTACGATGTTTGGCGGCTCCTCAGGGCAGTCAGCAGCTATCAATTGCAAACTTCTACGTCAGCAATAATCTGAAAAGTGTAGTCAGAAATGGGGCTATCAGTGTCGGGGAGTCATTTAGCGTTTCTATCTTCTTTACAATTACCTTCCCCCTTTTTAGATTTGCTAGATTTGAGAACTCATTCATATGTTATTGGTTGCGTGCCCCTTTTTTTCCCTGCTAA 990 0.4566 MEQEEEPQQNEPPHSHSQSRCVTLPPGCRFHPSEELLLSYYLTNKNGTGNWNGNGGLGFDGSDLIRELDFYDYDPFELPDFACFAYGYGGRRRHWYCFTTVRVSRGERWKRKRKVKSGFWLKRGRVSNVNGVGENVVLGTRTRFVFYMGDSAKNGARTDWVLYEYALVDHVMASFVLCRVFSKPRYKNSASDIGLSCCAEESVSAVRHIGIQHDEHVKLDAVEAKVCDDISIDHNNEICAGGNSDNQVKNAHDIDALRCLAAPQGSQQLSIANFYVSNNLKSVVRNGAISVGESFSVSIFFTITFPLFRFARFENSFICYWLRAPFFPC 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04095 329 MobiDBLite consensus disorder prediction 1 21 - -
Arst6g04095 329 SUPERFAMILY NAC domain 20 183 IPR036093 GO:0003677|GO:0006355
Arst6g04095 329 Pfam No apical meristem (NAM) protein 25 167 IPR003441 GO:0003677|GO:0006355
Arst6g04095 329 Gene3D NAC domain 33 187 IPR036093 GO:0003677|GO:0006355
Arst6g04095 329 ProSiteProfiles NAC domain profile. 24 183 IPR003441 GO:0003677|GO:0006355
Arst6g04095 329 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 24 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04095 Arst-Chr6 109113806 109117969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04095 23 184 NAC Transcription Factor Family AT1G71930 31.737 1.57e-20 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst6g04095 NAM 2.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04095 - - adu:107495754 632.869