Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04088 ATGAAGAAGGAACATGCTCCATATCCGGGTGCAGTGCGTCCAAGATTTAAACCCAGTTCAAACAACAAAATTGATAAGCTTGAGGGGCCTATACACCGCCGTCAACTTTGGAGAAACATCAAGGCCCGGTTCAAGAATAATTTGGATATTTTCGACTGGATTCAAAGCAAAGTAAAAAAATACAAAAATGGAAGAAAGTCTATCACGGAACTAAGTTCAGATGTTGCTGTACTTATGCGGGGCCATCCAGATCTTATTAACGAGTTTAACAAATGGATTCCCAGGACTCCTCAAGATTCATGTACATTAACAACATATTTGGAAAACCGTGATTTGCAGGATAAGGACTCTGATGAAATATCTTGGGATATATTTAAAGATATAGATACTGATTCTGATGCCGAGGACAATGATTGGATCTCGGAAGTGACAAGCTCGACTAAGCTTCGTGGATGTGGATGTACAGACCCCCATAGCATTTGGAAAAAGATCAAGGATCGGTTTAAGTACAATATGGAGATTTGCGATTCACTTCAAAATAAAGTGGATAAGTACGTTGATGGAAGAAAGTCTATCAGCCAATTAAGTTTAGATGTTGCTGCACTTTTGCGGGGCCATCCGGATCTTATTAATGAATTTCGCAAATGGATTCCCATTATTTCCGATAATAATTTGCAGGATAAGAGTCCCGGAGATGTATCCGAGACGACCAGTATTAGTTCTACTGACTTTGACTCTGATTCTGACTCTGATTCTGACTTTGGCACTTATAGTGATATGTCAGATGCGATGGATTAA 798 0.3947 MKKEHAPYPGAVRPRFKPSSNNKIDKLEGPIHRRQLWRNIKARFKNNLDIFDWIQSKVKKYKNGRKSITELSSDVAVLMRGHPDLINEFNKWIPRTPQDSCTLTTYLENRDLQDKDSDEISWDIFKDIDTDSDAEDNDWISEVTSSTKLRGCGCTDPHSIWKKIKDRFKYNMEICDSLQNKVDKYVDGRKSISQLSLDVAALLRGHPDLINEFRKWIPIISDNNLQDKSPGDVSETTSISSTDFDSDSDSDSDFGTYSDMSDAMD 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04088 265 Gene3D Paired amphipathic helix 159 218 IPR036600 GO:0006355
Arst6g04088 265 ProSiteProfiles PAH domain profile. 23 96 IPR003822 GO:0006355
Arst6g04088 265 ProSiteProfiles PAH domain profile. 145 220 IPR003822 GO:0006355
Arst6g04088 265 Pfam Paired amphipathic helix repeat 59 91 IPR003822 GO:0006355
Arst6g04088 265 Gene3D Paired amphipathic helix 36 94 IPR036600 GO:0006355
Arst6g04088 265 MobiDBLite consensus disorder prediction 226 245 - -
Arst6g04088 265 SUPERFAMILY PAH2 domain 38 94 IPR036600 GO:0006355
Arst6g04088 265 PANTHER SIN3B-RELATED 38 98 IPR039774 GO:0003714
Arst6g04088 265 MobiDBLite consensus disorder prediction 226 265 - -
Arst6g04088 265 SUPERFAMILY PAH2 domain 154 218 IPR036600 GO:0006355
Arst6g04088 265 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04088 Arst-Chr6 109026504 109029470 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst6g04088 PAH 1.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04088 - K11644 adu:107495749 521.161