Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04042 ATGAGTGATTTACAATGGAAGAAGCTGGAGATCTTAGGAGCGGGTTCTTATGGCACTGTTTATCTTGGCATTCTTGTTGATGAACAAATACGGTTTCATAGCTTCATTGCTGTGAAGAGCTCTATTCCCAAATTGGCATTCTCACTGAAGAAAGAGGAACAGATTTTTAAATCAGTTTCGGAAGGTGAAAGCGGTGGTTACCAAGAAATCATTCAATGCTTTGGAAGTGAGACCACGGTAGAGCATGGACGTTGCTTTTACAATCTTTTCTTGGAGTATGCTCCTCACGGTTCTTTGGCTGACTTGATCCACAAGAAACCTCTTTCCGAGACCGAGGTGAGTGTCTATGCACGCATGATTGTTAAAGGGCTTTCGCATATTCATCGCAAAGGAATCGTCCACTGTGACCTCAAGCCAGAAAACATTCTTGTGTTTCCTTCATTGGATAAAGAGATTGCAAACTATCAATTGAAGATTGCGGATTTTGGATTATCGAAGACCAAAGAGGAGGAAGTAAATGTTGAGTTGTGGAAGTCCAAGCCAAGAGGTACGCCGTCATACTTGTCACCGGAAGCGTTTTCCGGTCATATTGATGCTCCGATGGATATATGGGCACTTGGTTGCATAGTGATTGAAATGCTCACTGGATTGCCTGCCTGGGGTGAGAGCCCTTTGCTTATTGAGGAGTTGAGGTACTTGGTTGAGCATCATGAACTATCACCCAAGAAGCCTCAGGAAATCGGTTTTTTCTGTCATGATTTTCTGGAAAAGTGCTTTATGAAGGATCCTAGCAAGAGATGGACTGCTGACAGGCTTCTTGATCATCCTTTCCTTTATATCACATTGTTTCATTCATATTATCTTGCAACTTGGCTATGA 879 0.4255 MSDLQWKKLEILGAGSYGTVYLGILVDEQIRFHSFIAVKSSIPKLAFSLKKEEQIFKSVSEGESGGYQEIIQCFGSETTVEHGRCFYNLFLEYAPHGSLADLIHKKPLSETEVSVYARMIVKGLSHIHRKGIVHCDLKPENILVFPSLDKEIANYQLKIADFGLSKTKEEEVNVELWKSKPRGTPSYLSPEAFSGHIDAPMDIWALGCIVIEMLTGLPAWGESPLLIEELRYLVEHHELSPKKPQEIGFFCHDFLEKCFMKDPSKRWTADRLLDHPFLYITLFHSYYLATWL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04042 292 SUPERFAMILY Protein kinase-like (PK-like) 6 279 IPR011009 -
Arst6g04042 292 SMART serkin_6 6 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04042 292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Arst6g04042 292 Gene3D Transferase(Phosphotransferase) domain 1 4 287 - -
Arst6g04042 292 Pfam Protein kinase domain 7 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04042 292 ProSiteProfiles Protein kinase domain profile. 6 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04042 292 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Arst6g04042 292 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 6 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04042 Arst-Chr6 108642055 108642933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04042 4 280 MAP Kinase Kinase Kinase AT4G36950 42.606 1.70e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Arst6g04042 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04042 - - adu:110278796 560.836