Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04040 ATGTTGTGTGCTTGCTCAGGGGAGCAATTCAAATTCGAGGAGGCACCGCCGCAGTCACCGGAGTCATTGGCAACGAGAGATTTCTCTGCCAGTGGACTTTCTTCATCAAGGACTGGGGGTGATTGGGATTCTAAATTTGATCAGAACCAAGTTGAAGAAGCTGAATCAACTCTTAAAGAAGCTCTTTCTTTGAACTATGAGGAAGCTCGGGCTTTGCTGGGGAGGCTTGAATATCAAAGAGGGAACTTTGATGCTGCCCTTCAAGTTTTTCAGGGCATTGAAATCAAGGCCTTGACACCAAGGATGATAAGAGCCATTGCTGAAAGAACTAGGCCAAAAAAACAACGTTCTAGAGCTGATAATGTGGTCCCTAATGTGATGTCAATGCATTCAGTAAGCCTTCTTGTTGAGGCAATCTTGCTTAAATCCAAGTCCTTAGAGGAACTCGGGCGATACACCGGGGCTGCAAACACGTGCAGCATAATTCTGGATATGGTTGAGTCTGCTCTTCCTAATGGAATGCCGGATGGCATCGCCGAAGAGTGTAAGTTGCAAGACATGTTCCACAGAGCAATTGAATTGCTTCCAACTCTATGGATCAAGGCAGGTAATTTAGACGAAGCTGTCATGGCTTATCGCCGTGCTTTGATCAAGCCGTGGAATATGGAGCCAGGAAAGTTGGCCAGTATGCAAAAAGATTTGGCCACCACACTACTCTATTGTGGTGCTGAAGTAGACCTGCCGCCACAATTACAAGCTAGGTCTCCAGCGACACCAAAGAGTAACATCGAAGAAGCAATACTTTTGCTATTAGTACTCATGGCAAAGATGGTGGTTCAGGAAATACAATGGGACAGTGAAACAGCGGATCATCTAACATTCGCACTTTCTGTTACCGGAATGTTTGAATCATTGGCTGATTATGTGGAGCAGATCCTTCCTGGTATCTATGATCGAGCCGAGAGATGGTACTTTCTTGCTCTTTGTTACAGTGCAGCTGGTCAGGACGAAGTGGCCTTGAATTTATTGAGGAAGTCTTGTGGTAGTTCTGAAGCAAATTGCAGACCCCATTTCCCTTCATTTTTGTTTGGTGCTAAACTGTGTTCCCGGTATCCAAACCATGCTCTTGAAGGCATTAAGTTTTCCCGCAAAGCTATCGATCTAGCAAAGCTTCAAAATAAGCATTTTTTGGGTCAGGGCAAAAAATTTCTGGGTGTTTGCTCCGGCACTGCGGCTAGAAGATCTGTGCTGGATTCTGAAAGAACTATATTTCAAAGAGAGTCTTTGAACTTTCTAAATGAGGCTGCTCTAAGTCAAAATGATGATCCTGAAGTGATCTTCAACCTTGGACTTGAAAATGCAATTCAAAGGAATCTTGATGCAGCTTTTGACAATATAATGATGTACTCAGATATGACTGTTGGTAGCTCGAAAAGAGGTTGGCAACTGTTAGCGCTCATAGTATCTGCACAACAGCGGTTTAAGGATTCAGAAACAATAGTTGATTTTGCGTTAGAAGATACTGAAAAGATTGACCAGTTAGAACTTCTGAGATTGAAAGCAGTACTCCAGATCGCGCAGCAGAAACCGAAGCAAGCAGTAGAGACCTACAGAATCTTGCTAGCACTGATCCAGGCTAAAAAGGAGCCTTGGCATCAAGATAAGAAGAACTTTGATCAAGCAAAAGCATTCAAACATGAGGCACTTCAAGAAAGGAAGTTGGAAATGGAAGCATGGCAGGATTTGGCAACAATATATGCAGACTTTAGTTCATTTCTTGATGCAAAAGCTTGTCTTGACAAAGCTCAGTTAATAGAATTTTTCTCTCCCAGAAGTTGGCACATTACTGGAATGTTATTTGAAGCGCAATCATTATACCAGGAGGCCTTTGTTTCATTCTCAATCTCATTGTCAATAGAACCTGATTACATTCCAAGTATTATTTCATCTGCAGAATTGATGATCAAACTTGGTATGCAATCACTTCCAATTGCAAGAAGCTTTTTGATGAATGCATTGAGAATAGAACCAACAAACCATGATGCTTGGTTCAACCTTGGATTGGTTTCTAAAATGGAAGGTTCATTACAACAAGCAGCAGATTTCTTTCAAGCTGCATATGAACTCAAGCTTTCAGCTCCAGTGCAAAAATTTGAGTAA 2160 0.4222 MLCACSGEQFKFEEAPPQSPESLATRDFSASGLSSSRTGGDWDSKFDQNQVEEAESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIEIKALTPRMIRAIAERTRPKKQRSRADNVVPNVMSMHSVSLLVEAILLKSKSLEELGRYTGAANTCSIILDMVESALPNGMPDGIAEECKLQDMFHRAIELLPTLWIKAGNLDEAVMAYRRALIKPWNMEPGKLASMQKDLATTLLYCGAEVDLPPQLQARSPATPKSNIEEAILLLLVLMAKMVVQEIQWDSETADHLTFALSVTGMFESLADYVEQILPGIYDRAERWYFLALCYSAAGQDEVALNLLRKSCGSSEANCRPHFPSFLFGAKLCSRYPNHALEGIKFSRKAIDLAKLQNKHFLGQGKKFLGVCSGTAARRSVLDSERTIFQRESLNFLNEAALSQNDDPEVIFNLGLENAIQRNLDAAFDNIMMYSDMTVGSSKRGWQLLALIVSAQQRFKDSETIVDFALEDTEKIDQLELLRLKAVLQIAQQKPKQAVETYRILLALIQAKKEPWHQDKKNFDQAKAFKHEALQERKLEMEAWQDLATIYADFSSFLDAKACLDKAQLIEFFSPRSWHITGMLFEAQSLYQEAFVSFSISLSIEPDYIPSIISSAELMIKLGMQSLPIARSFLMNALRIEPTNHDAWFNLGLVSKMEGSLQQAADFFQAAYELKLSAPVQKFE 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04040 719 SUPERFAMILY TPR-like 46 465 IPR011990 GO:0005515
Arst6g04040 719 Gene3D Tetratricopeptide repeat domain 659 715 IPR011990 GO:0005515
Arst6g04040 719 Gene3D Tetratricopeptide repeat domain 483 658 IPR011990 GO:0005515
Arst6g04040 719 ProSiteProfiles TPR repeat profile. 610 643 IPR019734 GO:0005515
Arst6g04040 719 MobiDBLite consensus disorder prediction 11 45 - -
Arst6g04040 719 Gene3D Tetratricopeptide repeat domain 42 347 IPR011990 GO:0005515
Arst6g04040 719 SMART tpr_5 320 353 IPR019734 GO:0005515
Arst6g04040 719 SMART tpr_5 514 547 IPR019734 GO:0005515
Arst6g04040 719 SMART tpr_5 610 643 IPR019734 GO:0005515
Arst6g04040 719 SMART tpr_5 680 713 IPR019734 GO:0005515
Arst6g04040 719 MobiDBLite consensus disorder prediction 22 45 - -
Arst6g04040 719 ProSiteProfiles TPR repeat profile. 680 713 IPR019734 GO:0005515
Arst6g04040 719 PANTHER PROTEIN NPG1 1 719 IPR043376 -
Arst6g04040 719 PANTHER PROTEIN NPG1 1 719 IPR043376 -
Arst6g04040 719 Coils Coil 59 79 - -
Arst6g04040 719 Pfam Tetratricopeptide repeat 44 92 - -
Arst6g04040 719 SUPERFAMILY TPR-like 554 710 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04040 Arst-Chr6 108630032 108635269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04040 1 718 Calmodulin-binding Proteins AT1G27460 59.722 0.0 861