Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04036 ATGGAAGGAAAGATTAGAATAGAAGAGCATTCATTGGCTCCATTACAACACTATGATAGTGCTTCTGAGGATGAATATGTGAGCATTTTGATTGAGAGGGAAACGGGTACTCTTGCTTTCAAAAATATTGAGTCTTTCATATTTGTGAATTGCTTCAGTCATTCACGCATGAATGCTCTTAATTGGATTCTTCAGACAAGAGCAACACTTGGTTTTAGCTTTCAAACAGCTTATTTGTCCATGGCATACTTTGACAGATTCCTTTCCAAATGTTCCATTGATAGTGGTAAGTGTTGGAAAATGAGGTTGCTATCAATTGCATGTCTTACTCTAGCTGCAAAAATGGAGGAGAGTGAAGTGCCGGTGCTAACCGAGTTTCAATCGGAAGATTATTGCTTCGAAAACAAAGTGATTCAGAGAATGGAGCTCTTGGTGCTTAGCACATTGGAATGGAACATGGTTATGATCACCCCATTAGTTTTCCTTCCTTATTTCATCACAAAGCTCTGCAATGAATCCCAAACATGCCATGTTTTGTCCAAGACTATTCAAATCATCTTCACACTAATACAAGAGGTCAATTTAATGGATCATAGACCATCTGTTATTGCGGCTGCGGCGACTTTGGTGGCAATGGATCAGCACTTGACAGTAGAATCAGTAAAATTGAAGATGAGTTCAATTCATGAATTCAGATTTCTTGTAGCTGAAGATATATTTGCATACTATGATCAAATTCAAAGTTTCTACATTGAGAAAGAAAACTATAAGACACAAGAGAAGGAGAGTTACACTCAATAA 801 0.3745 MEGKIRIEEHSLAPLQHYDSASEDEYVSILIERETGTLAFKNIESFIFVNCFSHSRMNALNWILQTRATLGFSFQTAYLSMAYFDRFLSKCSIDSGKCWKMRLLSIACLTLAAKMEESEVPVLTEFQSEDYCFENKVIQRMELLVLSTLEWNMVMITPLVFLPYFITKLCNESQTCHVLSKTIQIIFTLIQEVNLMDHRPSVIAAAATLVAMDQHLTVESVKLKMSSIHEFRFLVAEDIFAYYDQIQSFYIEKENYKTQEKESYTQ 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04036 266 SUPERFAMILY Cyclin-like 139 229 IPR036915 -
Arst6g04036 266 SMART cyclin_7 61 147 IPR013763 -
Arst6g04036 266 ProSitePatterns Cyclins signature. 56 87 IPR006671 -
Arst6g04036 266 CDD CYCLIN_AtCycD-like_rpt1 56 151 - -
Arst6g04036 266 SUPERFAMILY Cyclin-like 21 153 IPR036915 -
Arst6g04036 266 Gene3D - 49 148 - -
Arst6g04036 266 CDD CYCLIN_AtCycD-like_rpt2 156 220 - -
Arst6g04036 266 Pfam Cyclin, C-terminal domain 156 259 IPR004367 -
Arst6g04036 266 Gene3D - 149 263 - -
Arst6g04036 266 Pfam Cyclin, N-terminal domain 54 153 IPR006671 -
Arst6g04036 266 PANTHER CYCLINS 23 219 IPR039361 -
Arst6g04036 266 FunFam Cyclin-D5-1 51 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04036 Arst-Chr6 108603830 108605355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04036 17 228 Core Cell Cycle Gene Families AT4G37630 37.500 1.71e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04036 K18811 - gmx:100798728 289.656