Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04033 ATGGGGACCGAGAGCACGACAAATTACTCTTATTTGGGGCGCAGCATAAGCCATCTCACCATCAACGAGGAGTCCTCTTCCTCCGCCTTTAGCGATTGCAACAGCGATAGATCCGGTGAATTCTCCGCTGCCTCTTCTCAGACTCGCCGCCTCCTACTTGCGTGTGCCACCGACAACTCTGACGAATTAATCCGACAGCTCGTGTCTGATCTGGGTTCTGATTCCGTCAATGAGCAAAAACAAGCAGCCATGGAGATCCGCCTCCTTGCGAAGAATAAGCCGGAGAATCGAATTAGAATCGCCGAAGCCGGAGCGATCAAACCGTTAATTTCGCTTATTTCGTCGCAAGACCTTCAACTTCAGGAGTACGGCGTCACAGCTATTCTCAACTTATCCCTATGTGACGAGAACAAAGACGCCATAGCTTCTGCCGGCGCGATTCGATCTCTGGTTCGGGTGCTGAGTTCAGGAAATTCAACAGCGAAGGAGAACGCGGCGTGCGCGCTTCTCCGACTGTCGCAGGTGGATGCTTATAAGCCGGCAATAGGAAGGGCGGGCGCGATTCCGCCGCTTGTAAAGCTTCTGGAAATCGGGAGTGGCCGCGGAAAAAAGGACGCGTCAACTGCTCTGTACTCGCTCTGTTCTACTAAAGATAACAAGGTAAGGGCAGTGAAGGCAGGGATAATGAGGGTGCTGGTGGAGTTGATGGCAGACTTGGAGGGAGACATGGTAGACAAATCAGCTTACGTGGCGAGCGTAGTGGTGACAGTAGCGGAGGGAAGGGCTGCGTTTGTGGCAGAAGGGGGGATTCCAGTGCTGGTAGAGATAGTGGAGGTTGGGACGCAGAGGCAAAAAGAAATTGCTGTGGTTATACTTTTGCAGATTTGTGAAGAGAGTGCTACTTACAGAAAGCTTGTGTTTGACGAAAGCGCCATCCCTCCTTTGGTTGCTTTGTCCCAATCTGGCACCAATCGCGCCAAAGAAAAGGCAGAGAAACTGATTGAGCTTCTAAGGCAACCAAGATCCAACAATGGCACTGCTCGTGCGTCAGAAGTGTCACCGTGA 1065 0.5192 MGTESTTNYSYLGRSISHLTINEESSSSAFSDCNSDRSGEFSAASSQTRRLLLACATDNSDELIRQLVSDLGSDSVNEQKQAAMEIRLLAKNKPENRIRIAEAGAIKPLISLISSQDLQLQEYGVTAILNLSLCDENKDAIASAGAIRSLVRVLSSGNSTAKENAACALLRLSQVDAYKPAIGRAGAIPPLVKLLEIGSGRGKKDASTALYSLCSTKDNKVRAVKAGIMRVLVELMADLEGDMVDKSAYVASVVVTVAEGRAAFVAEGGIPVLVEIVEVGTQRQKEIAVVILLQICEESATYRKLVFDESAIPPLVALSQSGTNRAKEKAEKLIELLRQPRSNNGTARASEVSP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04033 354 Gene3D - 17 199 IPR011989 -
Arst6g04033 354 SUPERFAMILY ARM repeat 61 336 IPR016024 -
Arst6g04033 354 PANTHER U BOX DOMAIN-CONTAINING 63 338 - -
Arst6g04033 354 Gene3D - 203 338 IPR011989 -
Arst6g04033 354 Pfam Armadillo/beta-catenin-like repeat 178 215 IPR000225 GO:0005515
Arst6g04033 354 Pfam Armadillo/beta-catenin-like repeat 94 132 IPR000225 GO:0005515
Arst6g04033 354 Pfam Armadillo/beta-catenin-like repeat 135 173 IPR000225 GO:0005515
Arst6g04033 354 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 104 146 IPR000225 GO:0005515
Arst6g04033 354 SMART arm_5 93 133 IPR000225 GO:0005515
Arst6g04033 354 SMART arm_5 134 174 IPR000225 GO:0005515
Arst6g04033 354 SMART arm_5 256 297 IPR000225 GO:0005515
Arst6g04033 354 SMART arm_5 175 215 IPR000225 GO:0005515
Arst6g04033 354 FunFam RING-type E3 ubiquitin transferase 53 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04033 Arst-Chr6 108547393 108550315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04033 42 344 U-box Gene Family AT2G23140 48.845 4.23e-82 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04033 - - gmx:100797550 496.123