Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04024 ATGGAATTTCTAGGAGCATTCCCTAATAATATAGAATTGGATTGCTTCAAAATGTTTTCTAATGAAAAAGAGCATGATTTCACTTACACTACTACTACTACTTCACAATTGTTTCTAGATCAAAGTTCATCACTTTTAGGAGAAGATGATGAATTGAATTTTGGATTAGTACAATCCACACTTTCCTCCAATTTTATTAGTGATGAAAATGAGCATTATTTGTTTCATTCTTTAGATGCTAATCCCAACACAAAAATGTTGCATTATAAGTCACAAGAAGAGAGTAGTTACAATAGCGGCGGTTTCAGTGGTGGTGACACTACTTTCTTCAATGCCAACATGGATCTTACAACAAACTACTACTATTCTAGTAATTACCATGATGATAATGTGCTAGCAAATGATGTTTCTATATCCATGGAGTTATTGGAAAATTATGATCATTATCAATGTCATCAAATGGAACATGTTGATGTTGTTCCAAACAATAAGCAGTTGGAGCTCAAGAGGAAGATTGTTGAAGTACCAGAATTTGATGTGTCTGCTGAAAACAATACAAGTAACGGATCTAAGAATCAAAAGAAAAAACATTTCGTCGCGAAAGATGAGCAAGATTGCATGAAAAATGAAAGGTGTAGGAAGAGAAAAGTTGTTAGAAATGGGAATGAAGGAGAAGAGAGAAATAATAATGTAGGGTTAGATGGACAGAGCTCAAGTAGTAACATTAACATATGTGAGGATGACAATGCTTCTGAAGAAAACAATGGAGGGGTAACTTCGGTATCTCACTCAAATGGGAAAACAAGAACCATTAGAGGAACAGCAGCAGATCCCCAGAGTCTCTATGCAAGGAAAAGAAGAGAGAGGATAAATGCGCGGTTAAGAATTTTGCAGGGTCTTGTTCCAAATGGAACAAAGGTTGATATAAGTACAATGCTTGAAGAGGCAGTTAATTACGTGAAATTTTTGCAGCTCCAAATCAAGCTTTTAAGCTCTGATGATCTATGGATGTATGCTCCTCTTGCTTATAATGGACTTGACATTGGACTCAAACTCAATAACCTCAAGAATTTTTCATCATCACCATGA 1089 0.3535 MEFLGAFPNNIELDCFKMFSNEKEHDFTYTTTTTSQLFLDQSSSLLGEDDELNFGLVQSTLSSNFISDENEHYLFHSLDANPNTKMLHYKSQEESSYNSGGFSGGDTTFFNANMDLTTNYYYSSNYHDDNVLANDVSISMELLENYDHYQCHQMEHVDVVPNNKQLELKRKIVEVPEFDVSAENNTSNGSKNQKKKHFVAKDEQDCMKNERCRKRKVVRNGNEGEERNNNVGLDGQSSSSNINICEDDNASEENNGGVTSVSHSNGKTRTIRGTAADPQSLYARKRRERINARLRILQGLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDLWMYAPLAYNGLDIGLKLNNLKNFSSSP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04024 362 Gene3D - 274 331 IPR036638 GO:0046983
Arst6g04024 362 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 274 323 IPR011598 GO:0046983
Arst6g04024 362 MobiDBLite consensus disorder prediction 182 202 - -
Arst6g04024 362 MobiDBLite consensus disorder prediction 224 275 - -
Arst6g04024 362 CDD bHLH_AtIND_like 275 337 - -
Arst6g04024 362 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 279 338 IPR036638 GO:0046983
Arst6g04024 362 MobiDBLite consensus disorder prediction 217 280 - -
Arst6g04024 362 Pfam Helix-loop-helix DNA-binding domain 284 324 IPR011598 GO:0046983
Arst6g04024 362 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 84 346 - -
Arst6g04024 362 SMART finulus 280 329 IPR011598 GO:0046983
Arst6g04024 362 FunFam Basic helix-loop-helix transcription factor 275 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04024 Arst-Chr6 108491509 108493531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04024 142 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 48.848 4.00e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst6g04024 HLH 7.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04024 - - aip:107648570 601.668