Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04005 ATGAGTGATTTACAATGGAAGAAGGTGGAGGTCTTGGGAGCAGGTTCTTATGGCACTGTTTATCTTGGCATTCTTGTTGATGAACAAAAACGGTTTCATAGCTTCATTGCTGTGAAGAGCTCTATTCCCAAACTGGCATTCTCACTGAAGAAAGAGGAACAGATTTTTAAATCAGTTTGGGAAGGTGAAAGCAGTGGTTGCCAAGAAATCATTCAATGCTTTGGAACTGAAACCACAGTAGAGCATGGACGTTGCTTTTACAATCTTTTCTTGGAATATGCTCCTCACGGTTCTTTGGCTGACTTGATCCACACGAAACCTCTTCCCGAGACCGAGGTGAGTGTCTATGCACGCATGATTGTTAAAGAGCTTTCGCATATTCATCGCAAAGGAATCGTCCACTGTGACCTCAAGCCGGAGAACATTCTTGTGTTTCCTTCATTGGATAAAGAGATTGCAAACTATCAATTGAAGATTGCGGATTTTGGATTATCGAAAACCAAAGAGGAGGAAGCAGATGTTGAGTTGTGGAAGTCCAAGCCGAGAGGTACGCCATTATACTTGTCACCGGAAGCGTTTTCTGGTCATATTGATGCTCCGATGGATATATGGGCACTTGGTTGCATAGTGATTGAAATGCTCACTGGATTGCCTGCCTGGGGTGAGAGCCCTTTGCTTATTGAGGAGTTGAGGTATTTGGTTGAGCATCATGAACTATCACCCAAGAAGCCGCAGGGAATCGGTTTTTTCTGTCATGATTTTCTGGATAAGTGCTTCATGAAGGATCCTAGCAAGAGATGGACTGCTGACAGGCTTCTTGATCATCCTTTCCTTTATATCACATTCAACGACCAACAACCCCAACACTCCCTCGCGATTCCCGAGGACGACCTCGGCGTTAAGCGCGTGAGGGACCTCAAGAAGCGGAAGCGCGAGGAGCCTGTTGCTTCGGGGACTCTCAGGATCTGGAATCCTGAGTTCGTTGAAGAAGAAGATGAGGAAGGCGAGGGTGTGGTTGAGAAGAGGGTTTGGGAGTGGAGGAAGAGGTTGGTGGAGAAGATGAACGGGATTGAGCTGAATCTTGAAGGGGTTAAGTTCAAGCTTGATGTTGCTGTTCCCGATTCGGATGATTTTGAGGCAATGAAGAAAGATTGGGAACAGTTTTTTGCGTTTGATACTCGAGCTAGTGAGAAAGGCTTAGTAGCTTTTGTTATGGTAGTCAAATTGGTCAAGGATGAAATTGAAGACGATTATCAACTTCAGGGAGTGTACATCGAATTAGAGTCTCTTCGCAGATTAAGGACTAAAGTTGATGCCTAA 1320 0.4492 MSDLQWKKVEVLGAGSYGTVYLGILVDEQKRFHSFIAVKSSIPKLAFSLKKEEQIFKSVWEGESSGCQEIIQCFGTETTVEHGRCFYNLFLEYAPHGSLADLIHTKPLPETEVSVYARMIVKELSHIHRKGIVHCDLKPENILVFPSLDKEIANYQLKIADFGLSKTKEEEADVELWKSKPRGTPLYLSPEAFSGHIDAPMDIWALGCIVIEMLTGLPAWGESPLLIEELRYLVEHHELSPKKPQGIGFFCHDFLDKCFMKDPSKRWTADRLLDHPFLYITFNDQQPQHSLAIPEDDLGVKRVRDLKKRKREEPVASGTLRIWNPEFVEEEDEEGEGVVEKRVWEWRKRLVEKMNGIELNLEGVKFKLDVAVPDSDDFEAMKKDWEQFFAFDTRASEKGLVAFVMVVKLVKDEIEDDYQLQGVYIELESLRRLRTKVDA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04005 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Arst6g04005 439 ProSiteProfiles Protein kinase domain profile. 6 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04005 439 Pfam Protein kinase domain 7 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04005 439 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 6 332 - -
Arst6g04005 439 Gene3D Transferase(Phosphotransferase) domain 1 4 322 - -
Arst6g04005 439 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Arst6g04005 439 SUPERFAMILY Protein kinase-like (PK-like) 6 281 IPR011009 -
Arst6g04005 439 SMART serkin_6 6 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04005 Arst-Chr6 108330988 108332923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04005 4 280 MAP Kinase Kinase Kinase AT4G36950 42.606 3.89e-64 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Arst6g04005 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04005 - - aip:107647747 709.909