Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03941 ATGGTTTCTGCAGCCTCTCCAAGAATACCCACCGAGACGGTGAAGAACGCCGTGGAGGCTCTCCTGAAGTGGCGAGATTCCAATTCCGAGTCTCACAAACCCAAACTCTTCGACGCCGACGAAGAATTCGTTTACTTAGTCGTCACTCTGAAAACCATCCCTCACAAATCCCGCGTTAACTCTTACAAGGTCCCTTTACCCCACTCTCTCCTCTCTCCCTTCAACGAAACTTGCCTCATCATCGACGACAGGTCCAAATCCAAACTCACTAAACAAGAAGCTCAAAAGAAGATCAAGGCCGATAACGTCGCCGTTTCCAAGGTCCTCAGGTTGTCGAAGCTGGCCTCCGATTACCGCCCTTTTGAGGCGAAGCGGAAGCTCTGTGATTCATATGATCTTTTTTTCGCTGATAAGAGAGTGGTGCCTTTGATGCCCAGGCTGTTGGGGAAGAAATTCTTTAAGAAGAAGAAGGTGCCGGTGCAGGTGGACTTGATTAAGAAGAATTGGAAGGAGCAGGTGGATAAGGCGTGTTCGTCGGCGCTTCTGTTTCTTGGAACGGGGACTTGTTGTGTTGTGAAGGTTGCCAAGGTTTCCATGGAGAGCGAGCAGATTGTTGAGAATATGATGGCTGCCATTGAGGGGGTTGTTGAGGTTGTGCCGAAGAAGTGGGCGAATGTGAGGTCCTTGCATGTTAAGCTTTACGAGTCGCTGGCGCTGCCTGTTTTCCAGGCTGTTCCGGAGGTGAAGTTGAGGATTGAGGGAAGTAAGGTTGAGGAGGCGGAGAAAGAGAAGCAGACGATGGAGGAGGAGGAGGAGGAAGAGGGCGAAGACCATAGTGGCGCGAAGCGGTGA 852 0.5106 MVSAASPRIPTETVKNAVEALLKWRDSNSESHKPKLFDADEEFVYLVVTLKTIPHKSRVNSYKVPLPHSLLSPFNETCLIIDDRSKSKLTKQEAQKKIKADNVAVSKVLRLSKLASDYRPFEAKRKLCDSYDLFFADKRVVPLMPRLLGKKFFKKKKVPVQVDLIKKNWKEQVDKACSSALLFLGTGTCCVVKVAKVSMESEQIVENMMAAIEGVVEVVPKKWANVRSLHVKLYESLALPVFQAVPEVKLRIEGSKVEEAEKEKQTMEEEEEEEGEDHSGAKR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03941 283 CDD Ribosomal_L1 14 241 IPR028364 -
Arst6g03941 283 FunFam Ribosomal protein L1p/L10e family 87 178 - -
Arst6g03941 283 SUPERFAMILY Ribosomal protein L1 12 242 IPR023674 -
Arst6g03941 283 Pfam Ribosomal protein L1p/L10e family 34 236 IPR028364 -
Arst6g03941 283 Gene3D - 87 179 IPR016095 -
Arst6g03941 283 Gene3D - 184 238 - -
Arst6g03941 283 Coils Coil 250 277 - -
Arst6g03941 283 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 17 236 - -
Arst6g03941 283 MobiDBLite consensus disorder prediction 256 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03941 Arst-Chr6 107651253 107655261 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03941 42 232 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 28.125 7.62e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03941 K14775 - ahf:112697689 503.442