Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst6g03940 | ATGAAGAAGGAACGTGCACCACGTCCGGGTGTAGTACGGCCAAGATTTAAACCCAATACACGTCCATACAACAAAAGCAAGCTTGATGCGGTTATACAACGCCTTAAACTTTTCAGAAACATCAAGGCCCGATTCAAATACAATTTGGATTTGGATATTTACAGCTCGCTTCTAAACAAAGTATTTAAGTACAGGACCGGAAGAAAGTCTATCACCCAACTGAGCTCAGATGCTGCTATACTTATGCGAGGCCATCCAGATCTTATTGACCAGTTTAACAAATGGATTCCCCGTACTCGTCAAGATTCATGTACGTTACTCTCGCACCACTTGGCAGCAACACATTTGGAGAACCGTGATCTACAGGATGAGGGCGATGATGAAGTATCTACGGATACTGATATTGATACAGATAGTGATGCTGAAGATTGGGACTGGTTGAAAAGGTCGACTAAGCTTGGTGGATGTACAGGCCCCTATAAAGTTTGGAAGATTTGGAAAAAGATCAAGGATCGGTTTAAGTGCGATATGGAGATTTGTGAGTCGCTAAAGGATAAGGTGGACAAGTACAAAGATGGAAGAAAGTCTATCATCCAACTAAGTTCCGACGTTGCTACACTTTTGCGGGGCCATCCCGATCTTATTGAGGAATTTCGCGAATGGATTCCCATCACTCCGAATGAGGGATCCGATGAAGTATCTAGCGATACTAGCTTTAGTACCACTGATACTGACGCCGATATATACAATGATACATCTTCAGATGCCATGGATTAA | 777 | 0.4286 | MKKERAPRPGVVRPRFKPNTRPYNKSKLDAVIQRLKLFRNIKARFKYNLDLDIYSSLLNKVFKYRTGRKSITQLSSDAAILMRGHPDLIDQFNKWIPRTRQDSCTLLSHHLAATHLENRDLQDEGDDEVSTDTDIDTDSDAEDWDWLKRSTKLGGCTGPYKVWKIWKKIKDRFKCDMEICESLKDKVDKYKDGRKSIIQLSSDVATLLRGHPDLIEEFREWIPITPNEGSDEVSSDTSFSTTDTDADIYNDTSSDAMD | 258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst6g03940 | 258 | SUPERFAMILY | PAH2 domain | 37 | 97 | IPR036600 | GO:0006355 | |
Arst6g03940 | 258 | Gene3D | Paired amphipathic helix | 27 | 97 | IPR036600 | GO:0006355 | |
Arst6g03940 | 258 | MobiDBLite | consensus disorder prediction | 228 | 258 | - | - | |
Arst6g03940 | 258 | ProSiteProfiles | PAH domain profile. | 149 | 225 | IPR003822 | GO:0006355 | |
Arst6g03940 | 258 | PANTHER | SIN3B-RELATED | 167 | 226 | IPR039774 | GO:0003714 | |
Arst6g03940 | 258 | SUPERFAMILY | PAH2 domain | 167 | 223 | IPR036600 | GO:0006355 | |
Arst6g03940 | 258 | MobiDBLite | consensus disorder prediction | 225 | 258 | - | - | |
Arst6g03940 | 258 | Gene3D | Paired amphipathic helix | 166 | 223 | IPR036600 | GO:0006355 | |
Arst6g03940 | 258 | ProSiteProfiles | PAH domain profile. | 21 | 99 | IPR003822 | GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst6g03940 | Arst-Chr6 | 107640693 | 107645569 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Arst6g03940 | PAH | 0.00018 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst6g03940 | K11644 | - | adu:107495749 | 262.692 |