Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03923 ATGGAGAATGATTTCTACAGTTCTTCACTGAACATGGAGCATAATCCTACACCAAAGCCACTTCTTCAGTGCTATTCATTTGATCTTAATAACCAAAACAACATCATAAATGGAATTCCAATGCTTGATTTAGACCAAGGAAGTGTTGATGGTAATAGCTTCATAAATTCTTCAAGTATTCTTAATTCTAATTCATTCGTTACTTCATCACAAGGAAAGACTACAGTAGGAGATACCTCAAATGCGACCGGAAATGGCGAGTTTCATGAGAATTTAGCCGGAGGAACGCAGCCGAACGGCGCGCTGGCTTCTCCGCTCACAACCATTCTTGCTGCTAGAATTGGCCTTCAAGAAAATCTAGAGAATTCAGCAACTTTGTTGCCTTCATTTGAGGCACTAGGACAATATGTCTTCAATAATTGGCATGATACTACTTCAAATTCAAGCCCTTTTCCGGCGAATTTCTATGGCGATCGTGGCTACGATGAAGTCCCTAGTAATGGTAAGTGGAGCTTTAACAAGTTTCCAAAAGCACCAGAGGTTGAAGGAAGTGGATTGGTACCATATGCATCCATAGGGAATCTTGATCCTAATGGATGGACATCATTGAATGCTGCAAATTTGGCTAATCATGCTTACAATTCTTCGAGTTATAGCAACGAGCTATCGTTAAGTCTTGCTACTTCGCCGGCTGCAGCTCAGTGCTCGGAGATTAGCTGCTCCGATGTGAGCTGTGGCATGAATGAAACAAGGACAGGATTGGAGAAAGGTTCTTGCAGCAGTAGGGAACTGTCTATGAGTTTAGGTTCTGAAAAACATGTCCGGTTTTCGCCGGTGATACTTGGATCAAAGTACCTTGTAGGAATTCAAGAGGTACTGGCTCAAATTGCAGCATATTCAATTGAGAATGTAGAAGAGGTGAATTATTTAGGTGCTGGTGATAGAGCTGGAGGAAATAAATCAACATCAGGTTTTGCACAAAAGACTACACCAGCAACAAATTCAAATGCAAATTCTTCTATGTTTGAAGCTCATGCAGAGTCTCCATTGCAAAGACATGCAGCTGAATCAAACAAATCCCAGTTGCTGACACTTTTACAGCTGGTGGACAGCCGATACAGTCAGTGTTTGGATGAGATACACACTGTTGTACACGCAGCAACAGAGCTCGATCCGTGCATACACGCACACTTTGCGCTCCAAACAATTTCTGTACTATACAAGGACTTGAGGGAGAGGATCAGCAATCATATTCTTGCAACAGGGTCCAATTTTGGCGACTCGTGCTCGGAAGATAAGGAATGGTCAGTTGATACTTCATTCATTCAAAAGCAATGGGCTATCCAGCAGTTGAAAAGAAAAGATCAGCTCTGGAGGCCTCAAAGGGGATTGCCTGAAAAATCTGTCTCAGTTCTTCGTGCTTGGATGTTCCAGAACTTCCTCCATCCGTATCCTAGAGATGCAGAAAAGCATTTACTTGCTGTAAAAAGTGGATTAACTAGAAGTCAGGTATCTAACTGGTTCATAAATGCTCGTGTTCGGTTATGGAAACCTATGATTGAGGAAATGTATGCCGAAATGAATAGAAGAAAGGCTTGTCGAATCGAAGAAGGGATGGAAGATGGCCATAGAAGCAGGCTAAGCATGAACAATCATTACTTTAATATGAATTGA 1674 0.4188 MENDFYSSSLNMEHNPTPKPLLQCYSFDLNNQNNIINGIPMLDLDQGSVDGNSFINSSSILNSNSFVTSSQGKTTVGDTSNATGNGEFHENLAGGTQPNGALASPLTTILAARIGLQENLENSATLLPSFEALGQYVFNNWHDTTSNSSPFPANFYGDRGYDEVPSNGKWSFNKFPKAPEVEGSGLVPYASIGNLDPNGWTSLNAANLANHAYNSSSYSNELSLSLATSPAAAQCSEISCSDVSCGMNETRTGLEKGSCSSRELSMSLGSEKHVRFSPVILGSKYLVGIQEVLAQIAAYSIENVEEVNYLGAGDRAGGNKSTSGFAQKTTPATNSNANSSMFEAHAESPLQRHAAESNKSQLLTLLQLVDSRYSQCLDEIHTVVHAATELDPCIHAHFALQTISVLYKDLRERISNHILATGSNFGDSCSEDKEWSVDTSFIQKQWAIQQLKRKDQLWRPQRGLPEKSVSVLRAWMFQNFLHPYPRDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNRRKACRIEEGMEDGHRSRLSMNNHYFNMN 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03923 557 Gene3D - 461 539 - -
Arst6g03923 557 Pfam Associated with HOX 279 415 IPR006563 -
Arst6g03923 557 MobiDBLite consensus disorder prediction 320 337 - -
Arst6g03923 557 SMART prehox3 274 416 IPR006563 -
Arst6g03923 557 Pfam Homeobox KN domain 475 514 IPR008422 GO:0003677|GO:0006355
Arst6g03923 557 ProSiteProfiles 'Homeobox' domain profile. 455 518 IPR001356 GO:0003677
Arst6g03923 557 CDD homeodomain 458 519 IPR001356 GO:0003677
Arst6g03923 557 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 211 537 - -
Arst6g03923 557 MobiDBLite consensus disorder prediction 316 337 - -
Arst6g03923 557 SMART HOX_1 458 522 IPR001356 GO:0003677
Arst6g03923 557 SUPERFAMILY Homeodomain-like 459 527 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03923 Arst-Chr6 107477268 107481320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03923 215 531 Homeobox Transcription Factor Family AT4G32980 55.108 5.76e-104 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Arst6g03923 POX 4.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03923 - - aip:107605517 980.319