Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03920 ATGGAGAATGATTTCTACAGTTCTTCACTGAACATGGAGCATAATCCTACACCAAAGCCACTTCTTCAGTGCTATTCATTTGATCTTAATAACCAAAACAACATCATAAATGGAATTCCAATGCTTGATTTAGACCAAGGAAGTGTTGATGGAGATACCTCAAATGCGACCGGAAATGGCGAGTTTCATGAGAATTTAGCCGGAGGAACGCAGCCGAACGGCGCGCTGGCTTCTCCGCTCACAACCATTCTTGCTGCTAGAATTGGCCTTCAAGAAAATCTAGAGAATTCAGCAACTTTGTTGCCTTCATTTGAGGCACTAGGACAATATGTCTTCAATAATTGGCATGATACTACTTCAAATTCAAGCCCTTTTCCGGCGAATTTCTATGGCGATCGTGGCTACGATGAAGTCCCTAGTAATGGTAAGTGGAGCTTTAACAAGTTTCCAAAAGCACCAGAGGTTGAAGGAAGTGGATTGGTACCATATGCATCCATAGGGAATCTTGATCCTAATGGATGGACATCATTGAATGCTGCAAATTTGGCTAATCATGCTTACAATTCTTCGAGTTATAGCAACGAGCTATCGTTAAGTCTTGCTACTTCGCCGGCTGCAGCTCAGTGCTCGGAGATTAGCTGCTCCGATGTGAGCTGTGGCATGAATGAAACAAGGACAGGATTGGAGAAAGGTTCTTGCAGCAGTAGGGAACTGTCTATGAGTTTAGGTTCTGAAAAACATGTCCGGTTTTCGCCGGTGATACTTGGATCAAAGTACCTTGTAGGAATTCAAGAGGTACTGGCTCAAATTGCAGCATATTCAATTGAGAATGTAGAAGAGGTGAATTATTTAGGTGCTGGTGATAGAGCTGGAGGAAATAAATCAACATCAGGTTTTGCACAAAAGACTACACCAGCAACAAATTCAAATGCAAATTCTTCTATGTTTGAAGCTCATGCAGAGTCTCCATTGCAAAGACATGCAGCTGAATCAAACAAATCCCAGTTGCTGACACTTTTACAGCTGGTGGACAGCCGATACAGTCAGTGTTTGGATGAGATACACACTGTTGTACACGCAGCAACAGAGCTCGATCCGTGCATACACGCACACTTTGCGCTCCAAACAATTTCTGTACTATACAAGGACTTGAGGGAGAGGATCAGCAATCATATTCTTGCAACAGGGTCCAATTTTGGCGACTCGTGCTCGGAAGATAAGGAATGGTCAGTTGATACTTCATTCATTCAAAAGCAATGGGCTATCCAGCAGTTGAAAAGAAAAGATCAGCTCTGGAGGCCTCAAAGGGGATTGCCTGAAAAATCTGTCTCAGTTCTTCGTGCTTGGATGTTCCAGAACTTCCTCCATCCGTATCCTAGAGATGCAGAAAAGCATTTACTTGCTGTAAAAAGTGGATTAACTAGAAGTCAGGTATCTAACTGGTTCATAAATGCTCGTGTTCGGTTATGGAAACCTATGATTGAGGAAATGTATGCCGAAATGAATAGAAGAAAGGCTTGTCGAATCGAAGAAGGGATGGAAGATGGCCATAGAAGCAGGCTAAGCATGAACAATCATTACTTTAATATGAATTGA 1596 0.4248 MENDFYSSSLNMEHNPTPKPLLQCYSFDLNNQNNIINGIPMLDLDQGSVDGDTSNATGNGEFHENLAGGTQPNGALASPLTTILAARIGLQENLENSATLLPSFEALGQYVFNNWHDTTSNSSPFPANFYGDRGYDEVPSNGKWSFNKFPKAPEVEGSGLVPYASIGNLDPNGWTSLNAANLANHAYNSSSYSNELSLSLATSPAAAQCSEISCSDVSCGMNETRTGLEKGSCSSRELSMSLGSEKHVRFSPVILGSKYLVGIQEVLAQIAAYSIENVEEVNYLGAGDRAGGNKSTSGFAQKTTPATNSNANSSMFEAHAESPLQRHAAESNKSQLLTLLQLVDSRYSQCLDEIHTVVHAATELDPCIHAHFALQTISVLYKDLRERISNHILATGSNFGDSCSEDKEWSVDTSFIQKQWAIQQLKRKDQLWRPQRGLPEKSVSVLRAWMFQNFLHPYPRDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNRRKACRIEEGMEDGHRSRLSMNNHYFNMN 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03920 531 MobiDBLite consensus disorder prediction 290 311 - -
Arst6g03920 531 Pfam Associated with HOX 253 389 IPR006563 -
Arst6g03920 531 Pfam Homeobox KN domain 449 488 IPR008422 GO:0003677|GO:0006355
Arst6g03920 531 SUPERFAMILY Homeodomain-like 433 501 IPR009057 -
Arst6g03920 531 SMART prehox3 248 390 IPR006563 -
Arst6g03920 531 SMART HOX_1 432 496 IPR001356 GO:0003677
Arst6g03920 531 ProSiteProfiles 'Homeobox' domain profile. 429 492 IPR001356 GO:0003677
Arst6g03920 531 CDD homeodomain 432 493 IPR001356 GO:0003677
Arst6g03920 531 MobiDBLite consensus disorder prediction 294 311 - -
Arst6g03920 531 Gene3D - 435 513 - -
Arst6g03920 531 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 187 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03920 Arst-Chr6 107477266 107481320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03920 189 505 Homeobox Transcription Factor Family AT4G32980 55.108 3.65e-104 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Arst6g03920 POX 4.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03920 - - aip:107605517 994.571