Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03889 ATGGAATTCCCCTCGTTTTCTTTGCAAATCACTCCCATTGAAGAAGAGTTTGATTTCGGTGATTGCTTCTCGATCATCTTCAATTGCACCAAAAAATTGATCCAAATTATTGAAAGCTCAAATCCAGGTGCCGAGGTTCAGTCTTGTTGTACTACAAGTACAGCCAGGGAAGCAATATTGGTTCCTTCAGAGATCCTATGTAGTGGTACTCCACTCACACACCTCAGCAGAGAAGACACAATCTTGTTACAACAAATCTGTTCTTCACTAAGTGTGTCCCCTCACCTATTAGACCAAATTTTATCTAACATAGTCCAAACTGCAAGAAGCTGTGACTCCAACACGCGGGAGATTGTTGTCAACCTTCATGTTACCTCCTACAATGTTGTTCAAGATTCTGATGCTGAATGCGCCATTTGTTTGGAGAAGTTTGAACATGGTAATGAAGATTCAAGCGTAGAAATTGTTCGTACGAATTGCAAGCATGTTTTTCATGATCGCTGCTTGCTCCGCTGGCTCCGACGCTGTGCCAACTGTGAGTCGCCATATTCTTGCCCATTGTGCCGCAGAATCATATTTCAAAGATGA 588 0.4235 MEFPSFSLQITPIEEEFDFGDCFSIIFNCTKKLIQIIESSNPGAEVQSCCTTSTAREAILVPSEILCSGTPLTHLSREDTILLQQICSSLSVSPHLLDQILSNIVQTARSCDSNTREIVVNLHVTSYNVVQDSDAECAICLEKFEHGNEDSSVEIVRTNCKHVFHDRCLLRWLRRCANCESPYSCPLCRRIIFQR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03889 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 193 IPR013083 -
Arst6g03889 195 CDD RING-H2 137 189 - -
Arst6g03889 195 PANTHER RING ZINC FINGER PROTEIN-RELATED 95 190 - -
Arst6g03889 195 Pfam Ring finger domain 136 189 IPR001841 -
Arst6g03889 195 SUPERFAMILY RING/U-box 125 194 - -
Arst6g03889 195 ProSiteProfiles Zinc finger RING-type profile. 137 189 IPR001841 -
Arst6g03889 195 SMART ring_2 137 188 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03889 Arst-Chr6 107167081 107167668 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03889 130 195 C3H Transcription Factor Family AT5G47610 37.879 2.69e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03889 - - adu:107495458 402.134