Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03878 ATGAGTCTTCGTAAGGGCGCTAAGGTTTGGGTCCAGGACAGGGTTGATGCTTGGATACCTGCCGAAGTTGTTGACTCCGGAGGCGGCGGCGGTGGCGGCGGAGTCAACAATAGTCGTATTCAGCTCATGACCGACTCCGGCAAGAAGGTTTTTTCTACTCCTGATAAGCTGTTTCCGCGGGATGCGGATGAAGAAGAGCATGGTGGAGTTGAAGACATGACTAAGCTGGCTTACTTGAATGAGCCAGGAGTGTTGTACAATCTTCGGAGGAGATATGCGCTCAATGATATCTATACTTATACAGGAAGCATTTTAATAGCTGTTAATCCCTTCACAAAGCTTCCTCATTTGTATGAAATCCATATGATGGAGCAGTATAAGGGAGCTCCATTCGGTGAGCTTAGCCCACATGTTTTCGCTGTTGCAGATTCTTCTTATAGAGCAATGATGAGTGAAGGTAAAAGTCAATCTATCTTGGTAAGCGGTGAAAGTGGTGCTGGCAAAACTGAGACAACAAAATTAATCATGCAGTATCTTACCTTTGTTGGTGGACGTGCTGCTGGTGACGATAGAACAGTTGAACAACAAGTTCTGGAATCAAATCCACTTTTAGAGGCATTTGGTAATGCAAGGACAGTCAGAAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAGTGGTAGAATATCTGGTGCTGCAATTAGAACATACTTATTGGAAAGATCACGAGTAGTGCAGATAACGAATCCAGAAAGAAATTATCACTGTTTTTATCAGTTGTGTGCATCTGAAATGGATGCAGAAAAGTATAAGTTAGGACATCCAAGCCACTTCCACTATTTAAACCAAAGTAAAATCTATGAACTTGATGGTGTAAGCAATGCTGAAGAATATGTGAAGACGAGGAGGTCAATGGATATTGTTGGCATAAGTCATGAGGACCAGGAAGCCATATTTCGTGTCTTAGCTGCAATTTTACATTTGGGGAATATTGAATTTTCTCCTGGAAAAGAGCATGACTCGTCAGTAGTAAAGGATGAGAAATCAAGATTTCATATGCAGATGGCTGCTGAACTCTTCATATGTGATGTAGAGCTACTACTAGCAACATTGTGTACTCGGTCAATACAAACTCGAGAGGGAAATATAATTAAAGCTCTTGATTGTAATGCTGCTGTTGCTGGACGGGATGCTTTGGCAAAAACAGTTTATGCTCGTTTATTTGATTGGCTTGTTGATAAGATCAATAGGTCTGTTGGTCAGGATACAAATTCTCAGATTCAAATTGGAGTTCTCGATATCTATGGCTTTGAGTGCTTCAAGGATAATAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAAGAGTATGGTAGAGAAGAAATAAACTGGAGTTACATTGAATTCGTGGACAACCAAGATGTGTTGGATCTAATTGAAAAGAAACCCATTGGTATCATTGCTCTCTTGGATGAAGCCTGTATGTTCCCAAAATCTACGTATGAAACATTCTCAACCAAGTTGTTTAACCATTTCCAGTCTCACCCGAGATTGGAAAAGGAGAAGTTTTCACAAACTGATTTCAGTATTTCTCATTATGCTGGAAAGGTTACATATCACACAGATTCCTTCTTAGACAAAAATCGTGATTATGTTGTAGTAGAACACTGTAATCTATTATCTTCTTCGAAATGCCCCTTTGTGTCTGGTCTTTTTCCTTTGCTACCAGAGGAATCTTCAAGATCATCTTACAAGTTTTCATCTGTGGCATCCAGATTTAAGCAACAACTCCAAGCTCTTATGGAGACCCTTAAATCAACAGAGCCTCATTACATACGATGCGTGAAGCCAAATTCTTTGAACCGACCACAAAAGTTTGAGAATTCCAGTGTCATACACCAATTGCGATGTGGGGGTGTCCTTGAGGCTGTTCGTATAAGCCTAGCTGGTTACCCCACCCGAAGGACTTATTCAGAGTTTGTGGATCGCTTTGGCTTAATAGGCCCTGAATTAATGGACGGGAGTTATGATGATAAAGTTGCAACTGAGAGAATTCTGAAGAAGCTCAAGCTTGATAACTTTCAGTTGGGTAGGACCAAAGTATTTCTCAGGGCTGGTCAAATTGGTATTTTAGACTCCAGACGAGCTGAGGTTCTGGACAATGCTGCAAAATGTATTCAGCGGCGACTGAGGACATTTATTTTACACAGGGATTTCATCTCACTCAGAGCTGCTGCAATTTCTATTCAGTCATGCTGCAGGGGGTGCATTGCACGAAAGATTTACGTTGCTAAAAGGGAGACCGCTGCAGCTATCTCTATTCAGAAATACATCCGTATGTGTCTAAAGAGGTGTGCTTACTTAGAACTATATTCATCTACTGTCATCATTCAGTCACATGTCCGTGGTTTTGCAACTCGCAAAAGATTCTTGCATGGAAAGGAGCATAGAGCTGCTACTGTTATTCAGGCATATTGGAGGATGGCCAAGGTTAGGTCAACTTTCCGACAACGTCAAGCTTCAATTGTGGCAATACAATGCCTTTGGCGGCGTAAACAAGCTAAAAGAGAGCTTCGGAGACTTAAGCAAGAGGCTAATGAGGCTGGTGCTCTCCGTTTAGCTAAGAGTAAACTTGAGAAGCAATTGGACGAGCTTACATGGCGTTTGCATCTTGAAAAGAAAATAAGGGGTTCCAATGAAGAGTCTAAGCAAATGGAGATTTCCAAACTTCAAAAGATGTTAGAAGCCTTGAATCTTGAATTAGATGCAGCTAAATTGGCAACAATTAACGAGTGCAATAAGAATGCTGTTCTGCAAAATCAGTTGGAATTGTCAATGAAGGAAAAATCTGCTTTAGAAAAAGAGTTGGTTGTAATGGAGGAAGTACGGAAGGAAAATGCTATCCTAAAGGATTCTTTGAGTGCCTTCGAAAAGAAGTGCACAAATTTGGAACTTGAACTCATGGATGCTCAAAAAGGCCGTATAGAAATGGTTGAGAAACTGAGAGAATTTGAACAGAAGTGTTCTCAACTTGAGCAAAGTGTTAAGAGCCTTGAGGGGAAGGTATTGAATTTAGAGGAAGAAAATCACGTGCTTCGGCAGAAAGCCTTAAGTGCTGCTCCTAAGAGTAACCGTTCAGGTCTTGCAAAGTCATTGTCAGAGAAATATTCAAGCGTAATTGCTTCCCGCACTGAGAGAAAGCCCCTATTTGAGACACCCACACCCACAAAACTTGCTCCTTTTACATCAGGCTTGACAGACCCTCGTCGTCCTAAGTTAACAGCAGAGAGGCACCAGGATAACTATGAATTTCTTTCTAGGTGTATCAAAGAAAATTTGGGATTTAAAAACGGTAAACCTCTGGCAGCTCGTATCATATACAAATGTCTTCTTCAATGGCGTGCCTTTGAATCTGAGCGCACAGCTATTTTTGATTACATAATTGAAGGCATAAACGATGTTCTAAAGGTTAAGGATGATGCCTCTCTATTGCCATATTGGCTTTCAAATACATCTGCCCTGCTGTGCCTTTTACAGAGGAACATACGTTCAAATGGCTTTTTAACTCCCACTGCTCATCGTCATACGGGATCTTCTGGTTTCAGCAGCCGATTAGGCCATGGACCAAAATCTCCAATGAAGCTTATTGGATATGAGGATGGTTTTTCACATGTGGAGGCAAGATATCCAGCTATACTTTTTAAGCAACAGCTCACTGCTTGTGTAGAGAAAATTTTTGGTCTTATACGAGATAATTTAAAAAAGGAACTCTCCCCTCTTCTGGGGCAATGTATTCAGGCTCCCAAAGCAGGACGATCCCATGGTGGAAAGTCAACCAGATCTCCTGGTGCACCTCCTCAACAATCATCTGGTGGTCAATGGGACAATATTGTCAAATTTTTGGACACACTCATGAGCCAACTTCGTGGAAACCATGTGCCTTCCTTCTTCATCCGCAAGCTAGTTACCCAGGTCTTTTCTTTCATCAATATAACCCTTTTTAACAGTCTTCTCTTGCGGCGTGAATGTTGCACATTCTCAAATGGTGAGTATGTGAAGTCTGGTCTAGCAGAATTGGAGAAGTGGATAGGCAATGCAACAGAGGAGTATGCAGGAACATCTTGGCATGAGCTTAATTATATAAGACAAGCTGTTGGGTTCTTGGTAATACATCAGAAGAGGAAGAAATCTTTGGAAGAGATTTGCCAAGATCTTTGCCCGGCACTGACGGTGAGGCAGATCTATCGAATCAGTACTATGTACTGGGACGACAAGTATGGAACCCAGAGCGTATCCAATGAGGTAGTCAGTGAAATGAGGGAAATTGTTAGTAAGGACAATCAAAACTTGACCTCAAATTCTTTTCTGTTGGATGACGATCTGAGTATTCCTTTCTCGGCCGAAGACATAGATATGGCAATCCCTGCTATAGATCCGGATGATATTGAGCTTCCACCATTCTTGTCTGAACATCCCTGTGCCGAATTTCTTACTTTGCTTCAGAAGTCTACTACAGTTTCATGA 4590 0.4133 MSLRKGAKVWVQDRVDAWIPAEVVDSGGGGGGGGVNNSRIQLMTDSGKKVFSTPDKLFPRDADEEEHGGVEDMTKLAYLNEPGVLYNLRRRYALNDIYTYTGSILIAVNPFTKLPHLYEIHMMEQYKGAPFGELSPHVFAVADSSYRAMMSEGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSSGRISGAAIRTYLLERSRVVQITNPERNYHCFYQLCASEMDAEKYKLGHPSHFHYLNQSKIYELDGVSNAEEYVKTRRSMDIVGISHEDQEAIFRVLAAILHLGNIEFSPGKEHDSSVVKDEKSRFHMQMAAELFICDVELLLATLCTRSIQTREGNIIKALDCNAAVAGRDALAKTVYARLFDWLVDKINRSVGQDTNSQIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGREEINWSYIEFVDNQDVLDLIEKKPIGIIALLDEACMFPKSTYETFSTKLFNHFQSHPRLEKEKFSQTDFSISHYAGKVTYHTDSFLDKNRDYVVVEHCNLLSSSKCPFVSGLFPLLPEESSRSSYKFSSVASRFKQQLQALMETLKSTEPHYIRCVKPNSLNRPQKFENSSVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIGPELMDGSYDDKVATERILKKLKLDNFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQRRLRTFILHRDFISLRAAAISIQSCCRGCIARKIYVAKRETAAAISIQKYIRMCLKRCAYLELYSSTVIIQSHVRGFATRKRFLHGKEHRAATVIQAYWRMAKVRSTFRQRQASIVAIQCLWRRKQAKRELRRLKQEANEAGALRLAKSKLEKQLDELTWRLHLEKKIRGSNEESKQMEISKLQKMLEALNLELDAAKLATINECNKNAVLQNQLELSMKEKSALEKELVVMEEVRKENAILKDSLSAFEKKCTNLELELMDAQKGRIEMVEKLREFEQKCSQLEQSVKSLEGKVLNLEEENHVLRQKALSAAPKSNRSGLAKSLSEKYSSVIASRTERKPLFETPTPTKLAPFTSGLTDPRRPKLTAERHQDNYEFLSRCIKENLGFKNGKPLAARIIYKCLLQWRAFESERTAIFDYIIEGINDVLKVKDDASLLPYWLSNTSALLCLLQRNIRSNGFLTPTAHRHTGSSGFSSRLGHGPKSPMKLIGYEDGFSHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGQCIQAPKAGRSHGGKSTRSPGAPPQQSSGGQWDNIVKFLDTLMSQLRGNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIGNATEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEICQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAIPAIDPDDIELPPFLSEHPCAEFLTLLQKSTTVS 1529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03878 1529 Gene3D - 444 629 - -
Arst6g03878 1529 ProSiteProfiles IQ motif profile. 837 866 IPR000048 GO:0005515
Arst6g03878 1529 FunFam Myosin heavy chain 258 312 - -
Arst6g03878 1529 Coils Coil 981 1057 - -
Arst6g03878 1529 ProSiteProfiles IQ motif profile. 812 841 IPR000048 GO:0005515
Arst6g03878 1529 Coils Coil 922 949 - -
Arst6g03878 1529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 837 892 IPR027417 -
Arst6g03878 1529 ProSiteProfiles IQ motif profile. 860 889 IPR000048 GO:0005515
Arst6g03878 1529 Pfam IQ calmodulin-binding motif 815 832 IPR000048 GO:0005515
Arst6g03878 1529 Pfam IQ calmodulin-binding motif 838 858 IPR000048 GO:0005515
Arst6g03878 1529 Pfam IQ calmodulin-binding motif 790 809 IPR000048 GO:0005515
Arst6g03878 1529 Pfam IQ calmodulin-binding motif 765 784 IPR000048 GO:0005515
Arst6g03878 1529 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 62 IPR004009 GO:0003774|GO:0005524|GO:0016459
Arst6g03878 1529 PANTHER MYOSIN 60 1456 - -
Arst6g03878 1529 PANTHER MYOSIN 60 1456 - -
Arst6g03878 1529 Pfam DIL domain 1343 1446 IPR002710 -
Arst6g03878 1529 Coils Coil 866 903 - -
Arst6g03878 1529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 787 834 IPR027417 -
Arst6g03878 1529 Gene3D - 673 739 - -
Arst6g03878 1529 MobiDBLite consensus disorder prediction 1290 1314 - -
Arst6g03878 1529 Gene3D - 258 315 - -
Arst6g03878 1529 Gene3D Kinesin motor domain 71 668 IPR036961 -
Arst6g03878 1529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 788 IPR027417 -
Arst6g03878 1529 Pfam Myosin head (motor domain) 70 726 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g03878 1529 CDD MYSc_Myo11 82 726 IPR036018 -
Arst6g03878 1529 SMART DIL_2 1342 1449 IPR002710 -
Arst6g03878 1529 SMART MYSc_2a 62 739 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g03878 1529 SMART MYSc_2a 62 739 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g03878 1529 Gene3D - 839 888 - -
Arst6g03878 1529 Gene3D - 790 838 - -
Arst6g03878 1529 Gene3D - 740 789 - -
Arst6g03878 1529 Gene3D Myosin VI head, motor domain, U50 subdomain 317 607 - -
Arst6g03878 1529 ProSiteProfiles IQ motif profile. 764 793 IPR000048 GO:0005515
Arst6g03878 1529 PRINTS Myosin heavy chain signature 434 462 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g03878 1529 PRINTS Myosin heavy chain signature 487 515 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g03878 1529 PRINTS Myosin heavy chain signature 98 117 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g03878 1529 PRINTS Myosin heavy chain signature 155 180 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g03878 1529 PRINTS Myosin heavy chain signature 202 229 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g03878 1529 SMART iq_5 859 881 IPR000048 GO:0005515
Arst6g03878 1529 SMART iq_5 811 833 IPR000048 GO:0005515
Arst6g03878 1529 SMART iq_5 763 785 IPR000048 GO:0005515
Arst6g03878 1529 SMART iq_5 740 762 IPR000048 GO:0005515
Arst6g03878 1529 SMART iq_5 836 858 IPR000048 GO:0005515
Arst6g03878 1529 SMART iq_5 788 810 IPR000048 GO:0005515
Arst6g03878 1529 ProSiteProfiles Myosin motor domain profile. 68 738 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g03878 1529 CDD MyosinXI_CBD 1118 1490 IPR037975 GO:0007015
Arst6g03878 1529 ProSiteProfiles Dilute domain profile. 1167 1467 IPR002710 -
Arst6g03878 1529 Coils Coil 957 977 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03878 Arst-Chr6 107060531 107078999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03878 1 1529 Myosins gene family AT4G33200 72.157 0.0 2264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03878 K10357 - gmx:100790815 2604.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03878 6 107060531 107078999 Arst6g03878 6 107060531 107078999 ECH