Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03877 ATGGAAGGTTCTATGACATTTAGATTTGGGGTGGTTCTTGTTGTTGCTGCTTTTCTTCTCAATTGTGGTTATGGCAACACTGTGGATTCAGATGATGGAGCAACATTGTTGGAGATAAAGAAGTCATTTAGGGATGTGGATAATGTTCTATATGACTGGACAGATTCACCTTCTTCAGATTATTGTGTTTGGAGAGGGATAACTTGTGATAATGTCACCTTCAATGTTGTTGCACTAAATCTTTCAGGACTGAATCTTGATGGTGAAATGTCACCAGCAATAGGGAACCTTAAGAGCTTGGTCACCATTGATCTCAAAGAAAACAGATTATCAGGGCAGATACCAGATGAGATTGGTGACTGTTCATCTTTACAAAGCTTGGACCTCTCATTCAATGAGATCAGAGGAGATATACCATTTTCAATATCAAAGTTGAAACAACTGGAAAATTTGGTTTTGAAGAATAACCAGTTGATTGGTCCAATCCCTTCAACTTTGTCTCAGATTCCTAACTTGAAGATTCTAGACCTGGCACAGAATAATCTAAGTGGCGAAATACCAAGACTTATATACTGGAATGAAGTTTTGCAGTATCTCGGCTTGCGAGGTAACAATTTGGTTGGTTCACTATCACCAGACATGTGCCAATTAACTGGATTGTGGTATTTTGATGTTAGAAACAATAGCTTGACAGGAAGCATTCCTGAAAGCATAGGAAACTGTACTTCATTCCAAGTCTTGGACATATCCTACAACAAAATCACTGGAGAGATACCATTCAACATTGGATTTCTTCAAGTAGCTACCTTGTCACTTCAAGGGAATAAACTCTCCGGCCATATTCCGTCGGTGATCGGTCTCATGCAAGCACTCGCCGTCTTAGATCTGAGTTGTAACATGTTAAGTGGATCAATCCCTCCTATCTTAGGAAACCTGACATACACAGAAAAATTGTATTTGCATGGAAACAAGCTCACAGGCTTCATCCCCCCGGAGCTAGGGAACATGACAAAGCTTCACTATTTGGAACTGAATGATAACCATTTAAGTGGGCGCATCCCACCCGAACTTGGAAAGCTTACTGATTTGTTTGACTTAAATGTTGCCAACAACAATCTAGAGGGGCCAATTCCCGATAACCTTGGTTCATGTAAAAGCCTTAACAGCCTCAATGTGCATGGGAACAAGTTGACTGGAACAATTCCTGGAGCGCTGAAGAGCTTGGAGAGTATGACTTATTTAAACCTTTCTTCCAACAATCTTCAAGGGCCTATTCCGATCGAGCTATCACGGATTGGTAATTTGGATACATTGGATATTTCAAATAATAATATAATTGGCTCCATTCCTTCTTCCCTCGGTGACTTGGAACATCTTCTAAAGCTGAACCTGAGCAGAAATCATATAACAGGATTTATTCCAGCAGAATTTGCTAATCTTAGAAGTGTTATGGACATTGATTTGTCAAATAATCAACTCTCTGGCTTGATTCCTCAAGAACTTAGTCAGCTTCAGAACATGGTGTCATTGAGGCTACAAAACAACAAATTATCCGGGGATGTGACGTCGCTTGTAAATTGCCTTAGTCTCTCGCTGCTTAATGTATCGTATAACAAACTAGTTGGTGTTATTCCCACAAGCAATAACTTTTCAAGGTTCCCTCCTGACAGTTTCATTGGAAACCCTGATCTTTGTGGCAATTGGTTGAATTCACCTTGTCATGTTAATCACCCTACGGAGCGAGCAACATTATCTAAGGCAGCTATTCTAGGAATTGCTCTTGGTGGCCTTGTAATCCTCCTTATGATATTGCTCGCAGCATGCCGGCCATACAATCCATCTCCTTTTCCAGATGGATCACTCGACAAACCAGTTAGTTTCTCTCCTCCGAAACTAGTGATTCTTCATATGAATATGGCGCTTCATGTGTATGAGGATATCATGAGGATGACTGAAAACCTGAGCGAGAAGTACATTATTGGATATGGTGCATCAAGCACAGTCTACAAATGTGTTCTCAAAAATTGCAAGCCAGTGGCTATCAAGAGGCTCTATTCTCACTATCCACAGTGCTTGAAAGAATTTGAGACCGAACTCGAGACTGTCGGAAGCATTAAGCACCGGAATCTTGTTAGTCTCCAAGGATACTCTTTATCCCCATATGGGCACCTTCTGTTTTATGACTACATGGAAAATGGCAGTCTATGGGATCTTCTTCATGGGGCTAGTAAGAAGAAGAAGCTCGACTGGGATATGCGTCTGAAGATAGCGCTTGGAGCAGCACAAGGGCTCGCCTATCTACATCATGATTGTAGTCCTCGGATCATACACAGGGATGTGAAATCATCAAACATTTTGCTGGATGGAGACTTTGAGCCCCATCTCACTGATTTTGGCATAGCCAAAGTTCTTTGCCCCACAAAGTCGCATACTTCGACTTACATAATGGGCACAATTGGCTACATAGACCCTGAGTATGCTAGAACCTCCCGGCTCACCGAGAAATCCGATGTGTATAGCTATGGTATTGTGTTACTTGAGTTGCTAACTGGAAGGAAAGCTGTTGACAATGAATCCAACCTCCATCATCTGATTTTGTCCAAGACAGCAAACAATGCAGTGATGGAAACTGTTGATCCAGACATCACTGCCACATGCAATGACCTTGGAGCAGTGAAGAAGGTCTATCAGCTTGCTCTATTATGCACAAAGCGGCAACCATCGGATCGGCCAACAATGCACGAAGTGACACGTGTCCTCGGCAGCCTCATGCCGTCCACCACCGCGGACGCCACCACCATTTCATCAAAACAACAAGAAGGAACTCTTCCACCACCTTCACTACCATGTGCAAAAGTTCCAGCATCATGCTACATTGATGAATATGCAAACCTCAAGACACCACACTTGGTTAATTGCCCTTCAATGAGTACCTCTGATGCACAACTTTTCCTCAAGTTTGGAGAGGTAATCTCCCAAAATAGTGAGTGA 2991 0.4219 MEGSMTFRFGVVLVVAAFLLNCGYGNTVDSDDGATLLEIKKSFRDVDNVLYDWTDSPSSDYCVWRGITCDNVTFNVVALNLSGLNLDGEMSPAIGNLKSLVTIDLKENRLSGQIPDEIGDCSSLQSLDLSFNEIRGDIPFSISKLKQLENLVLKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLVGSLSPDMCQLTGLWYFDVRNNSLTGSIPESIGNCTSFQVLDISYNKITGEIPFNIGFLQVATLSLQGNKLSGHIPSVIGLMQALAVLDLSCNMLSGSIPPILGNLTYTEKLYLHGNKLTGFIPPELGNMTKLHYLELNDNHLSGRIPPELGKLTDLFDLNVANNNLEGPIPDNLGSCKSLNSLNVHGNKLTGTIPGALKSLESMTYLNLSSNNLQGPIPIELSRIGNLDTLDISNNNIIGSIPSSLGDLEHLLKLNLSRNHITGFIPAEFANLRSVMDIDLSNNQLSGLIPQELSQLQNMVSLRLQNNKLSGDVTSLVNCLSLSLLNVSYNKLVGVIPTSNNFSRFPPDSFIGNPDLCGNWLNSPCHVNHPTERATLSKAAILGIALGGLVILLMILLAACRPYNPSPFPDGSLDKPVSFSPPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSPYGHLLFYDYMENGSLWDLLHGASKKKKLDWDMRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDGDFEPHLTDFGIAKVLCPTKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTANNAVMETVDPDITATCNDLGAVKKVYQLALLCTKRQPSDRPTMHEVTRVLGSLMPSTTADATTISSKQQEGTLPPPSLPCAKVPASCYIDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03877 996 Gene3D Ribonuclease Inhibitor 194 266 IPR032675 -
Arst6g03877 996 SMART serkin_6 654 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03877 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 775 787 IPR008271 GO:0004672|GO:0006468
Arst6g03877 996 ProSiteProfiles Leucine-rich repeat profile. 171 193 IPR001611 GO:0005515
Arst6g03877 996 ProSiteProfiles Leucine-rich repeat profile. 123 146 IPR001611 GO:0005515
Arst6g03877 996 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 304 576 - -
Arst6g03877 996 Pfam Protein kinase domain 657 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03877 996 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Arst6g03877 996 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 730 931 - -
Arst6g03877 996 ProSitePatterns Protein kinases ATP-binding region signature. 660 682 IPR017441 GO:0005524
Arst6g03877 996 Gene3D Transferase(Phosphotransferase) domain 1 730 941 - -
Arst6g03877 996 ProSiteProfiles Protein kinase domain profile. 654 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03877 996 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 194 303 - -
Arst6g03877 996 Gene3D Phosphorylase Kinase; domain 1 628 729 - -
Arst6g03877 996 Pfam Leucine rich repeat 366 421 IPR001611 GO:0005515
Arst6g03877 996 Pfam Leucine rich repeat 434 493 IPR001611 GO:0005515
Arst6g03877 996 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Arst6g03877 996 Gene3D Ribonuclease Inhibitor 29 193 IPR032675 -
Arst6g03877 996 Gene3D Ribonuclease Inhibitor 352 449 IPR032675 -
Arst6g03877 996 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 168 921 - -
Arst6g03877 996 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 625 729 - -
Arst6g03877 996 SUPERFAMILY Protein kinase-like (PK-like) 632 920 IPR011009 -
Arst6g03877 996 CDD STKc_IRAK 660 923 - -
Arst6g03877 996 SUPERFAMILY L domain-like 30 265 - -
Arst6g03877 996 SUPERFAMILY RNI-like 210 544 - -
Arst6g03877 996 Gene3D Ribonuclease Inhibitor 267 351 IPR032675 -
Arst6g03877 996 Gene3D Ribonuclease Inhibitor 450 575 IPR032675 -
Arst6g03877 996 SMART LRR_typ_2 288 312 IPR003591 -
Arst6g03877 996 SMART LRR_typ_2 336 360 IPR003591 -
Arst6g03877 996 SMART LRR_typ_2 97 121 IPR003591 -
Arst6g03877 996 SMART LRR_typ_2 408 432 IPR003591 -
Arst6g03877 996 SMART LRR_typ_2 456 479 IPR003591 -
Arst6g03877 996 SMART LRR_typ_2 217 241 IPR003591 -
Arst6g03877 996 SMART LRR_typ_2 504 531 IPR003591 -
Arst6g03877 996 SMART LRR_typ_2 169 193 IPR003591 -
Arst6g03877 996 SMART LRR_typ_2 480 503 IPR003591 -
Arst6g03877 996 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 29 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03877 Arst-Chr6 107042668 107050841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03877 99 941 Receptor kinase-like Gene Family AT5G07180 67.180 0.0 1142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Arst6g03877 Pkinase 6.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03877 K20718 - gmx:100782307 1718.75