Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03858 ATGAAAAAGCTGAAGAAATCTGAAATGCTCAAGAAAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTGCTGGCTGAGGTAGCCAGTCATTGCATCGTGAAACTTTACTACTCATTTCAAGATGCCGAGTACTTGTATTTAATTATGGAGTATCTGCCTGGGGGTGATATGATGACTCTTCTAATTAGGGAAGAAACCTTAAGTGAAGATATTGCTAAATTTTACATTGCACAAAGTGTTCTAGCCATAGAGTCTATTCATAGGCATGGTTACATTCACAGAGATATAAAACCTGATAACCTACTCTTAGACAAAAATGGTCACATGAAGCTCTCAGATTTTGGCCTCTGTAAGCCTCTTGACTGTACCACCTTGTATACACTGCATGAAAATCAGGTCATGGATGACAGAAATTTAGCAGAGCCAATGGATATTGATGGATCTATTCCTGGCATGGATAAGCATACCAGTTGGAGAAATCCACGTGAGCAGCTTGAGCATTGGCAGATGAACAGGAGAAAGTTGGCCTTTTCTACAGTGGGAACACCAGACTACATTGCTCCCGAAGTACTTCTGAAGAAAGGATATGGAATGGAATGTGACTGGTGGTCACTGGGAGCAATAATGTATGAAATGCTAGTTGGTTACCCTCCATTTTACTCGGAAAACCCTATGACTACCTGCAGAAAGATTGTTCATTGGAGAAATTTCTTAAGGTTTTCAGAAGATGCACAGTTGTCTCCAGAAGCTAAGGATCTAATCTGCAGATTGATGTGTGATGTTGACCATAGGTTAGGTACTCGAGGGGCGCATGAAATCAAGGCTCATCCTTGGTTCAATGGTGTAGAGTGGGATAAACTGTATGAAATGGAGGCAGCATTCAAACCACAAGTTGTTGGAGAGCTAGATACTCAGAACTTCATGAAATTTGATGAAGTTGATCCACCAACAAACGAAAGGCTTGGATCAGGAACCTCCCGGAAGATGCCCAAAGATCTAAACTTTGTTGGTTACACTTACAAGAACTTCGACGCTGTAAAAGGGCTGTGTCAAGGAGAGTCCATGCAAGAAATTTCTTCTAAATGGCCAGTTGAGGAAACCGGATTGCAAATGCTTGCATCATCCGGTGATCCCATGTTACCATAG 1149 0.4195 MKKLKKSEMLKKGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLSEDIAKFYIAQSVLAIESIHRHGYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCTTLYTLHENQVMDDRNLAEPMDIDGSIPGMDKHTSWRNPREQLEHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSENPMTTCRKIVHWRNFLRFSEDAQLSPEAKDLICRLMCDVDHRLGTRGAHEIKAHPWFNGVEWDKLYEMEAAFKPQVVGELDTQNFMKFDEVDPPTNERLGSGTSRKMPKDLNFVGYTYKNFDAVKGLCQGESMQEISSKWPVEETGLQMLASSGDPMLP 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03858 382 ProSiteProfiles AGC-kinase C-terminal domain profile. 281 351 IPR000961 GO:0004674|GO:0005524|GO:0006468
Arst6g03858 382 FunFam Non-specific serine/threonine protein kinase 179 298 - -
Arst6g03858 382 SMART serkin_6 1 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03858 382 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 319 - -
Arst6g03858 382 Gene3D Phosphorylase Kinase; domain 1 1 56 - -
Arst6g03858 382 Gene3D Phosphorylase Kinase; domain 1 299 309 - -
Arst6g03858 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672|GO:0006468
Arst6g03858 382 SUPERFAMILY Protein kinase-like (PK-like) 1 321 IPR011009 -
Arst6g03858 382 SMART pkinase_C_6 281 343 IPR000961 GO:0004674|GO:0005524|GO:0006468
Arst6g03858 382 Pfam Protein kinase C terminal domain 301 341 IPR017892 GO:0004674|GO:0005524|GO:0006468
Arst6g03858 382 Gene3D Transferase(Phosphotransferase) domain 1 57 125 - -
Arst6g03858 382 Gene3D Transferase(Phosphotransferase) domain 1 179 298 - -
Arst6g03858 382 FunFam Non-specific serine/threonine protein kinase 57 124 - -
Arst6g03858 382 ProSiteProfiles Protein kinase domain profile. 1 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03858 382 CDD STKc_NDR_like 1 342 - -
Arst6g03858 382 Pfam Protein kinase domain 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03858 382 Pfam Protein kinase domain 172 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03858 Arst-Chr6 106826653 106834145 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03858 1 381 AGC Kinase Gene Family AT4G33080 73.590 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Arst6g03858 Pkinase 1.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03858 K08790 - gmx:100815717 656.366