Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03854 ATGGTGGCTGTAGACAAAGATAAGAACAGTGTTGATGCATTTCGTTGGGCCACTGAGAATATTGATAATCCAATCGTCATTGCTGTTCATGTCAAGGATAAAGAAATTCCTCATCAGGGCAAGAATGTTTTCCCACCTGATGAAGAAGATTTAGAAAATATTTTCAATCAATTGCGTCAAGAGTGTCATCCTAAAGTCCTAAAGATGAAAGAAGCTGTAATACATGATAGTGATCCTGTTAAAGCAATAATAGAATATGCAGAAAGGAATCGTGTTCATACCCTTGTTCTTGGTGCACCAACCGGCTCCAACAAGAAGAACACTTTGGCAAAATCTCTCTCTCTTCAATTCACCAAGTCATCAAGCAAGAAAGTGAAAGGCGTAGAAGTAGCAACAGGTGTAATGAGAGCAGTCCCAGAATACATATCAGTGTATGTAATTAAAAAGGGAAAGATAGTGGCAGCAAGAGCATCAACACACCCATTGATTGGGGCAACACCACCAAGACAATCTAGTGTTGATTCTCTTCAATATGACTTGGAAAATAAAAGGGCATCATTAGTACCACCACAATTGATTAGAGGATTAAGCACCAACAGTTGTAGTAGATCTGAAAGAATAATGAATGATAACATGAGAAGGAGATTTTCAAGGTTGGATTCAATGGCGGAGAGCGTTGACCTAACTAGTTATCGACAAAGGTTATCAATGACCCATGATGAATCATCAAAAGCCTTTGACTTCAATTACTCTCCTTCTAATTGGGTCATTGATGATTCTTCCGACAAAATCTCTCCTATCACAAATTCCCCCCAAACGTTGAAAAGCTCAAGATCCAAAAGAGAAAAGAGTGACGTTGAAGCTGAGATGAATCAATTGAAGCAAATGCTGAAGCAAACTATGGACTTGTACAGTGTAGCTTGCAAAGAAGCAATTGCAGCCCAAAATAAGGCTAGAGAAATTAATCAATGGAAATTGAAAGAGGCGCCTAAGATTGAGCAAGCTAGGCTAGCCGAAGAGGCGGCCATGGCACTAGCCGAGGAGGAGAAGGCTAAGGCGAAGGCGGCGATGGAAAAGGCAGATGAAGCCATGAAAATGGCTGAAGAAGAAGCAAAGAAAAGAGCAGAAGCAGAGAGGAAGGCTAAATTGGAGGCAGAAGAGAAAGAGAGGGCCTTAAATGTTTTGGCTTATAAGGATTTTAGGTACAGGAAATACACCATTGGGGACATTGAAAAAGCTACTAATAATTTCTCCCTATCATTGAGAATTGGTGAAGGTGGATATGGACCTGTCTTTAAAGGCCAACTTGATCATACCCCTGTTGCTATCAAAATTCTGAGACCTGATGCTTCACAGGGCAGGAGACAGTTTCATCAAGAGGTTGAGGTATTATGCAGCATTAGGCATCCTAATATGGTCCTTCTCCTTGGTGCTTGCCCTGACTATGGATGCTTAGTGTATGAATTCATGGATAATGGTAGCTTAGAAGATAGACTAATCCGAAAAAATAATACCCCTCCTCTCTCATGGCCAAAACGGTTTGAAATAGCGGCCGAAATAGCGACCGCATTACTCTTTCTTCATCAGGCTAAACCGGAGCCAATCGTGCACCGAGATCTTAAACCGGCCAACATTCTCCTCGACCGGAATTTCGTAAGCAAAATAAGTGACGTCGGCCTAGCCAGACTAGTGCCGCCGTCCGTGGCCGACTCCGTGACACAATACTACATGACCACGGCCGCCGGCACCATGCATTATATTGATCCGGAGTACCAACAAACCGGAAAACTAACAACAAAATCGGATGTATACTCATTGGGAATAATGTTACTTCAAATAATAACGGCTAAGCCTCCATTAGGGTTAACTCATCAAGTTAAAAGAGCAATTGAAAAGGGTCAATTTTCTAATATTCTTGATCCTTCCATAAATGATTGGCCAGTTGAAGAGGCACTAAGCTTTGCTAAATTGGCATTGCAATGTTCGGAGCTAAGAAAAAAAGATAGGCCAGATCTTGGAACAGTTGTAGTGCCAGAATTGGATCGTTTAAGAAACTTTGGATATGAATCAATTGGCCATAACAATATTCTTCCTTTTAGCAACTTCTATCATGCAACATCATTACTCCCACCTCGTTCACCTACACAAGTCATCAACAATATTTAA 2166 0.4118 MVAVDKDKNSVDAFRWATENIDNPIVIAVHVKDKEIPHQGKNVFPPDEEDLENIFNQLRQECHPKVLKMKEAVIHDSDPVKAIIEYAERNRVHTLVLGAPTGSNKKNTLAKSLSLQFTKSSSKKVKGVEVATGVMRAVPEYISVYVIKKGKIVAARASTHPLIGATPPRQSSVDSLQYDLENKRASLVPPQLIRGLSTNSCSRSERIMNDNMRRRFSRLDSMAESVDLTSYRQRLSMTHDESSKAFDFNYSPSNWVIDDSSDKISPITNSPQTLKSSRSKREKSDVEAEMNQLKQMLKQTMDLYSVACKEAIAAQNKAREINQWKLKEAPKIEQARLAEEAAMALAEEEKAKAKAAMEKADEAMKMAEEEAKKRAEAERKAKLEAEEKERALNVLAYKDFRYRKYTIGDIEKATNNFSLSLRIGEGGYGPVFKGQLDHTPVAIKILRPDASQGRRQFHQEVEVLCSIRHPNMVLLLGACPDYGCLVYEFMDNGSLEDRLIRKNNTPPLSWPKRFEIAAEIATALLFLHQAKPEPIVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYYMTTAAGTMHYIDPEYQQTGKLTTKSDVYSLGIMLLQIITAKPPLGLTHQVKRAIEKGQFSNILDPSINDWPVEEALSFAKLALQCSELRKKDRPDLGTVVVPELDRLRNFGYESIGHNNILPFSNFYHATSLLPPRSPTQVINNI 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03854 721 SMART serkin_6 417 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03854 721 Gene3D HUPs 1 128 IPR014729 -
Arst6g03854 721 Pfam Protein tyrosine and serine/threonine kinase 420 675 IPR001245 GO:0004672|GO:0006468
Arst6g03854 721 SUPERFAMILY Protein kinase-like (PK-like) 400 676 IPR011009 -
Arst6g03854 721 PANTHER OS02G0152300 PROTEIN 2 690 - -
Arst6g03854 721 Gene3D Transferase(Phosphotransferase) domain 1 490 690 - -
Arst6g03854 721 Gene3D Phosphorylase Kinase; domain 1 396 489 - -
Arst6g03854 721 Coils Coil 276 303 - -
Arst6g03854 721 MobiDBLite consensus disorder prediction 260 275 - -
Arst6g03854 721 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 115 - -
Arst6g03854 721 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 390 489 - -
Arst6g03854 721 Coils Coil 343 394 - -
Arst6g03854 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Arst6g03854 721 ProSiteProfiles Protein kinase domain profile. 417 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03854 721 CDD STKc_IRAK 423 683 - -
Arst6g03854 721 MobiDBLite consensus disorder prediction 260 284 - -
Arst6g03854 721 Pfam Universal stress protein family 1 104 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03854 Arst-Chr6 106782517 106788522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03854 69 687 Receptor kinase-like Gene Family AT5G12000 56.171 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Arst6g03854 PK_Tyr_Ser-Thr 2.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03854 - - tcc:18588097 663.299