Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03850 ATGAGTAGTAGTACTAAGAAGACAACATGGAAATCTATGATGTTGATCCTAAGTTGTTGCAATTGCAAGAGTGAATTCAATTTGGAAATGGAGGAAGAAGAAGAATCAGAGAAGAAAAAATTGAAACAAGGTTCATTCCAGAGGCTATGTTTATCAGATGTAAGCAATTCAAGTTCATCACAAGCAATTGAAGATCTTTCAGTGTCACTAGCTGGATCAAAGCTTTATGCATTCACACTTGAGGAGTTAAGAGAAGCAACAAACAATTTCTCATGGAGTAACATGCTTGGTGAAGGTGGTTTTGGTCCTGTTTACAAAGGCTTCTTTGATGATAAACTTAGGCATGATTTGAAGCCTCAAACTGTTGCTGTTAAAAGATTGGACTTAGAAGGCTTGCAAGGTCATAAGGAGTGGCTGGCAGAGATTATATTTCTGGGGCAGTTAAGACATCCACATCTTGTTAAGTTAATTGGTTATTGTTATGAGGATGAAAACAGGCTTTTGGTGTATGAATACATGCCAAGAGGAAGCTTGGAGAATCAACTCTTCAGAAGGTACTCTGCTGCCATGCCATGGTCAACAAGGATGAAAATTGCATTAGGAGCAGCAAAGGGATTGGCCTTCCTTCATGGAGCAGATAAACCTGTAATATATAGGGATTTCAAAGCTTCAAATATCTTACTAGACTCGGATTTTACGGCGAAACTGTCGGATTTCGGTCTGGCTAAGGATGGACCTGAAGGGGAAGACACACATGTAACAACAAGAATCATGGGAACACATGGCTATGCTGCTCCTGAATACATCATGACAGGTCACCTTACAACCAAGAGTGATGTGTATAGCTATGGAGTTGTTCTATTGGAACTAATAACAGGAAAAAGGGTAGTGGACAAGTCCCTCACAAACAGAGGAAAAAGCTTGGTGGGGTGGGCAAGGCCTATGTTAAGAGACTCAAAGAAATTGAAGCAAATCATCGATAAAAAATTGGAAGGTCAATTCCCCATGAAAGGTGCCATGAAGGTTGCTTCTTTGGCTTATAGATGCTTATGTCACCATCCAAATCCAAGGCCTACTATGAGTGATGTTGTCAAGACATTGGAGCCACTCCAAGACTTTGATGATATTTTCTTGCGGCCATTTGTGTATGTTGCCACTAATCAAAATGGTAACATAGATACAAGGTAG 1188 0.4007 MSSSTKKTTWKSMMLILSCCNCKSEFNLEMEEEEESEKKKLKQGSFQRLCLSDVSNSSSSQAIEDLSVSLAGSKLYAFTLEELREATNNFSWSNMLGEGGFGPVYKGFFDDKLRHDLKPQTVAVKRLDLEGLQGHKEWLAEIIFLGQLRHPHLVKLIGYCYEDENRLLVYEYMPRGSLENQLFRRYSAAMPWSTRMKIALGAAKGLAFLHGADKPVIYRDFKASNILLDSDFTAKLSDFGLAKDGPEGEDTHVTTRIMGTHGYAAPEYIMTGHLTTKSDVYSYGVVLLELITGKRVVDKSLTNRGKSLVGWARPMLRDSKKLKQIIDKKLEGQFPMKGAMKVASLAYRCLCHHPNPRPTMSDVVKTLEPLQDFDDIFLRPFVYVATNQNGNIDTR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03850 395 FunFam Serine/threonine-protein kinase BIK1 56 172 - -
Arst6g03850 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Arst6g03850 395 FunFam Serine/threonine-protein kinase PBS1 173 376 - -
Arst6g03850 395 ProSiteProfiles Protein kinase domain profile. 90 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03850 395 Gene3D Phosphorylase Kinase; domain 1 51 172 - -
Arst6g03850 395 Gene3D Transferase(Phosphotransferase) domain 1 173 377 - -
Arst6g03850 395 CDD STKc_IRAK 96 370 - -
Arst6g03850 395 PANTHER OS01G0588500 PROTEIN-RELATED 52 371 - -
Arst6g03850 395 SUPERFAMILY Protein kinase-like (PK-like) 63 367 IPR011009 -
Arst6g03850 395 Pfam Protein tyrosine and serine/threonine kinase 92 367 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03850 Arst-Chr6 106727021 106729745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03850 78 367 Glycoside Hydrolase AT3G07070 53.242 7.93e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Arst6g03850 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03850 - - gmx:100802636 644.425