Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03830 ATGGAATCGGAGGATTCGGTGAGACTAGAATTGGAAGAATTGCAGAAGCAATTGGGGAAGAAGCAAAGATTCGAGAGCGCTGTTTCCTCTCTCAAATCCATGCTTCAGAGCAAATATCTATCAGCTTCTCCATCTCTTCGTAAATCTTTTTATTCGGTTATATGCCGAGTTGCTACCGTGTTGAAGACTAGATATACGGCACCGGGTTTCTGGAATGCTGGCCTAGGCCTGTTTGAGCAGGCTCAATTACTTGTTACTGAGCCTTCTGAGAAGGAGCACTTGAAGACTTGCATTGCTCAGGCCAGGGAACACTTGCATTTAGAAGATAACCCATCACAAACCTCGCAGCCTGCAGCGCAGAATAATATGAATGGAGGATATCTTTTCGAGGGGCATCTTACTGTAGATCCTGAACCTCCTCAGCCTCAATGGTTGGTGCAGTCAAACCTCTTGTCAACTGCTGCTACTTTGTTTGCTGCTGAATCGTCTCAAGGTTCGGCAGCGACTGATACCACACCAGAGAATGCAGCTAATGTGCTTCAAGAGCTTATAGATAGATTGGAAGAAGTCATGCCCCTGATGATTGAAGATGGTCCTATGGCTCCAAGGGCCCCTCCTGCCAGTAAAGAAGTCGTGGCGAGACTTCCTGTCATTACTCTCACAGAGGAAATACTGGCTAAGCTGGGGAAAGATGCAGAGTGTGCAATTTGCAGGGAGAACCTGGCTGTAGATGACAAAATGCAAGAGTTACCTTGCAGGCACACTTTCCATCCACCGTGTCTAAAACCATGGCTGGATGAACACAATTCTTGTCCGATATGCCGGTATGAGCTGCAAACTGATGATCATGCCTATGAGAGCTGGAAGGAACGGGAAAAGGAAGCTGAGGAGGAGAGGAAAGGTGCTGAAAATGCCGTTAGAGGTGGTGAATATATGTATGTCTAG 945 0.4688 MESEDSVRLELEELQKQLGKKQRFESAVSSLKSMLQSKYLSASPSLRKSFYSVICRVATVLKTRYTAPGFWNAGLGLFEQAQLLVTEPSEKEHLKTCIAQAREHLHLEDNPSQTSQPAAQNNMNGGYLFEGHLTVDPEPPQPQWLVQSNLLSTAATLFAAESSQGSAATDTTPENAANVLQELIDRLEEVMPLMIEDGPMAPRAPPASKEVVARLPVITLTEEILAKLGKDAECAICRENLAVDDKMQELPCRHTFHPPCLKPWLDEHNSCPICRYELQTDDHAYESWKEREKEAEEERKGAENAVRGGEYMYV 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03830 314 FunFam E3 ubiquitin-protein ligase RNF181 196 281 - -
Arst6g03830 314 Pfam Ring finger domain 233 275 IPR001841 -
Arst6g03830 314 ProSiteProfiles Zinc finger RING-type profile. 234 275 IPR001841 -
Arst6g03830 314 MobiDBLite consensus disorder prediction 294 314 - -
Arst6g03830 314 CDD RING-H2_RNF126-like 233 275 - -
Arst6g03830 314 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 126 278 - -
Arst6g03830 314 Coils Coil 285 305 - -
Arst6g03830 314 SMART ring_2 234 274 IPR001841 -
Arst6g03830 314 SUPERFAMILY RING/U-box 228 281 - -
Arst6g03830 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 198 281 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03830 Arst-Chr6 106544060 106546890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03830 7 314 C3H Transcription Factor Family AT5G20910 65.372 1.14e-137 390