Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03823 ATGGGAAAAGGCAAGATTAGGTGTACACTTTGGGAGGATTTTGCAACTAAGTTGGTCAAGCACATTGAAGAGCAGCCAACATCAGAGTACATCCTCATTATACAGTTCGCTAAGTTCAACCTCTTTAAAGGTGCAATGGGCATATCAAATACCAATCATAACTCAATTCTCTACATCAATGCGGACTTCCAAGAGGTTAAGGATTTTCGCAAGAGTGTCATCATGGCTGCGGTTCCATGTGCAAACCAACTATCCCAAATTGCTGCAGATCCAGCATACTCTATAGAGGATGATCTCATCAACAACTCCATTTACAAACCCATTTCTGAACTCAAGGCATCTATTGAGAACGGTTGGTGGTATAAAAGTTGTAAGCATTGCTTTCATTCACTAAGGGAGGCTGAGGATTCCTACTATTGTGCCAAGTGTGCCACCTATCCAACCACTCACACACCTAGGTATAGCATTAATATGAAGGTTGCTAATGATACTGATACAGCTGCATTCCTTCTTTATGACAAGGGAGCGGCCAAATTTCTTGGAATCTCTGCCTCTGACCTGCGGCTTGCACAGCTAACCAGGGGTGGAGTAAATGAGGAATACCCGATAGACCTCAATTCCTTTAGGGGTAAGAAATTCCTTTTCAAGGTTTCCGTCAAGATGGAAGATATAAATTCTTTCCAGCCTTGCAAGGTCATTGTGATGAAGCTGACGGATGAGATATCTCTTATAACAAAATTTTTAGGAAAGCATGATGTATACCAGCCAAACCTTGCATTGGAACACTCAGAACTGTTGAGCCTGCAAACTGCTTCCACCGACACGCCAAAGGGCGCGAGTTCTCCTTCTGTTGAGGCTTTGGTGGACAACTCTAACGATGCTTTCTTGACCCCCAAGAGAAACATTATTAGTGGTGGATGGTCTAAGCAACTCATTGATCTTTATCCAGACTCTGCTAATGGATCATCATCGAAGTGTAGAAGCTCGAAGATGGCATTCCCAGCGTTGATAAAGTCTACCAAGATTAGTCTGGATAGATTCTCAATCAAAATATATGGTGGACTAATGATCAAGCTCAAGTATCATAGTATATTTCCCAGTATCAATGTTGCGTATAATTATGGTTTCGTGTTGTGTCCTTTAATGAAGTGA 1152 0.4193 MGKGKIRCTLWEDFATKLVKHIEEQPTSEYILIIQFAKFNLFKGAMGISNTNHNSILYINADFQEVKDFRKSVIMAAVPCANQLSQIAADPAYSIEDDLINNSIYKPISELKASIENGWWYKSCKHCFHSLREAEDSYYCAKCATYPTTHTPRYSINMKVANDTDTAAFLLYDKGAAKFLGISASDLRLAQLTRGGVNEEYPIDLNSFRGKKFLFKVSVKMEDINSFQPCKVIVMKLTDEISLITKFLGKHDVYQPNLALEHSELLSLQTASTDTPKGASSPSVEALVDNSNDAFLTPKRNIISGGWSKQLIDLYPDSANGSSSKCRSSKMAFPALIKSTKISLDRFSIKIYGGLMIKLKYHSIFPSINVAYNYGFVLCPLMK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03823 383 Pfam Replication factor-A C terminal domain 116 238 IPR013955 -
Arst6g03823 383 SUPERFAMILY Nucleic acid-binding proteins 114 239 IPR012340 -
Arst6g03823 383 CDD RPA1_DBD_C 111 225 IPR047192 -
Arst6g03823 383 SUPERFAMILY Nucleic acid-binding proteins 5 72 IPR012340 -
Arst6g03823 383 PANTHER OS03G0429900 PROTEIN 9 245 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst6g03823 383 Gene3D - 101 247 IPR012340 -
Arst6g03823 383 Gene3D - 1 77 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03823 Arst-Chr6 106453568 106458322 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03823 3 234 Core DNA Replication Machinery Family AT5G08020 24.609 5.41e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03823 - - ahf:112707100 595.504