LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst6g03822	ATGGGAAAAGGCAAGATTAGGTGTACACTTTGGGAGGATTTTGCAACTAAGTTGGTCAAGCACATTGAAGAGCAGCCAACATCAGAGTACATCCTCATTATACAGTTCGCTAAGTTCAACCTCTTTAAAGGTGCAATGGGCATATCAAATACCAATCATAACTCAATTCTCTACATCAATGCGGACTTCCAAGAGGTTAAGGATTTTCGCAAGAGTGTCATCATGGCTGCGGTTCCATGTGCAAACCAACTATCCCAAATTGCTGCAGATCCAGCATACTCTATAGAGGATGATCTCATCAACAACTCCATTTACAAACCCATTTCTGAACTCAAGGCATCTATTGAGAACGGTTGGTGGTATAAAAGTTGTAAGCATTGCTTTCATTCACTAAGGGAGGCTGAGGATTCCTACTATTGTGCCAAGTGTGCCACCTATCCAACCACTCACACACCTAGGTATAGCATTAATATGAAGGTTGCTAATGATACTGATACAGCTGCATTCCTTCTTTATGACAAGGGAGCGGCCAAATTTCTTGGAATCTCTGCCTCTGACCTGCGGCTTGCACAGCTAACCAGGCCAAACCTTGCATTGGAACACTCAGAACTGTTGAGCCTGCAAACTGCTTCCACCGACACGCCAAAGGGCGCGAGTTCTCCTTCTGTTGAGGCTTTGGTGGACAACTCTAACGATGCTTTCTTGACCCCCAAGAGAAACATTATTAGTGGTGGATGGTCTAAGCAACTCATTGATCTTTATCCAGACTCTGCTAATGGATCATCATCGAAGTGTAGAAGCTCGAAGATGGCATTCCCAGCGTTGATAAAGTCTACCAAGATTAGTCTGGATAGATTCTCAATCAAAATATATGGTGGACTAATGATCAAGCTCAAGTATCATAGTATATTTCCCAGTATCAATGTTGCGTATAATTATGGTTTCGTGTTGTGTCCTTTAATGAAGTGA	969	0.4262	MGKGKIRCTLWEDFATKLVKHIEEQPTSEYILIIQFAKFNLFKGAMGISNTNHNSILYINADFQEVKDFRKSVIMAAVPCANQLSQIAADPAYSIEDDLINNSIYKPISELKASIENGWWYKSCKHCFHSLREAEDSYYCAKCATYPTTHTPRYSINMKVANDTDTAAFLLYDKGAAKFLGISASDLRLAQLTRPNLALEHSELLSLQTASTDTPKGASSPSVEALVDNSNDAFLTPKRNIISGGWSKQLIDLYPDSANGSSSKCRSSKMAFPALIKSTKISLDRFSIKIYGGLMIKLKYHSIFPSINVAYNYGFVLCPLMK	322

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst6g03822	322	SUPERFAMILY	Nucleic acid-binding proteins	5	72	IPR012340	-
	Arst6g03822	322	Gene3D	-	1	77	IPR012340	-
	Arst6g03822	322	Pfam	Replication factor-A C terminal domain	116	191	IPR013955	-
	Arst6g03822	322	SUPERFAMILY	Nucleic acid-binding proteins	114	188	IPR012340	-
	Arst6g03822	322	Gene3D	-	101	209	IPR012340	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst6g03822	Arst-Chr6	106453568	106458322	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst6g03822	3	209	Core DNA Replication Machinery Family	AT5G08020	24.242	2.98e-08	53.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst6g03822	-		-	aip:107643845	400.593