Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03788 ATGTTAGCTACTTTAGTCTCTTTCCACTTCCATAACATTCTTTTTCTTCTTCTTTTCACCCTTTCCCCTTCAATACTTCACTCACTGCACTTTAATATAAGTAGCTTCAAAAATGTTGAGAATGAAAAGGACAATATGGTATTATATGAAGGTGATGCCATGCCTATTGAAGGGTCCATAGAGCTAAACAAAAATGACATCAATCGAGTTGGACGTGCAGTCTGTGGCGAACCTTTGCACCTTTGGGACTCATCAACCAAGGCTCTCGCTGACTTCTCAACCGGTTTCTCATTCACTGTTTCTCAACCAACTAACATAACCGCCGACGGCTTTGCCTTCTACATGGCGCCTCTTGGCTACCAAATTCCAGCCAACTCATATGGTGGCTCTCTTGGACTCTTCAACACAACTACAGAGTATGGTGTAGTACAAAATCATGTTTTTATGGTGGAATTCGACACATTTATAAATCCTGAGTTTGATCCCCATGAACATCATGTTGGGATCAATAGCAACTCTCTCAAATCCTTAACCTATGCTTGGTATGATATTAATCACAACAATGGCAAAAAAACTCATGCTTTGATTACTTATAATTCTTCCACCAAGATCCTTAATGTGTCTTGGTTTTTCAATGCTAGTAGCACCAACACATTGTCCTATGAGATTGACCTTATGGAAATCTTACCAGAGTATGTGATGGTTGGATTTTCAGCTGCAACTGGCCCTTATAATTTTGAGCGAAATGTTATTCATTCTTGGAATTTCATGTCAACTTTGGAGTCCATTGATTCTGAGGTAAACAAAAAGAAGAAGAAGAAGAAGAAGAAGCAAAAAATGGTTATAGTTGCAGTAGCTTCTTCAATTTTTTTAGTGCTGGTGATAGGTAGTGTCTATTGGTTGACCATAATCATCAAGAAGAGAAGAACCAAGCATGTTCGAGATGATAATCTCGGAGGAACATTGGTGACTTCAGATCTTGGCAAAGCATCTATACCTAGAAGATTTGATTACAGAGAATTAACTGCAGCCACTGATGGCTTCTCAGAAGATAAAAGGCTTGGAAGAGGAGGCTCTGGTGAAGTTTACAAAGGATTCCTAAAAGATTTAGGACGTTTTGTCGCTGTGAAAAAGATTTTCGCCGACTTTCAAAACTCTGAGAAAATATTCATCAATGAGGTGAAGATTATAAGTCGACTTATACATAGAAATCTGGTACAATTCGTAGGGTGGTGTCATGAGCAACGAGAGTTCTTATTAGTTTTCGAGTACATGCCTAATGGAAGCCTCGATACGCACCTCTTTGGCAGTAGAAGAACTTTGGCTTGGGATGTAAGGTACAAGATGGCACTAGGCATTGCCACAGCACTTCATTACCTTCATGAGGATGCAGAACAATGTGTGCTTCATAGAGATATTAAGTCTGCTAACATTCTATTGGACACAGATTTTAGCACCAAGCTTTGTGATTTTGGCATGGCAAAATTGGTAGACCCAAGATTGAAGACTCAAAGGACAGGAGTTGTAGGGACATATGGGTACTTGGCACCAGAATATCTCAATGGAGGAAGGGCTAGCAAAGAATCAGATATATATAGTTTTGGGATTGTAGCTTTGGAAATTGCATGTGGAAGGAAGACTTACCAAGATGGAGAATATCATATTCCTCTAGTGAAGTGGGTATGGCAACTCTATGTGGAAGGGAATATTCTGAATGTTGCTGATGAAGGATTGAACAAGAATTTTGATGAACTTCAAATGACATGCTTGCTAATTGTGGGACTATGGTGTACCAACCCGAATGACAAGGAAAGGCCAAAAGCAGCACAGGTGATCAAGGTTCTTCAACTTGAATCGCCACTACCTGAGCTTCAACATGATATGCATGATCATCCTCTTCAACTAACCATGGTGAAGTTTAGAAATTCTTCTCAATCATCACCCATCACAAATAGCCTTGTCAACGATGGACGTTAG 1977 0.3971 MLATLVSFHFHNILFLLLFTLSPSILHSLHFNISSFKNVENEKDNMVLYEGDAMPIEGSIELNKNDINRVGRAVCGEPLHLWDSSTKALADFSTGFSFTVSQPTNITADGFAFYMAPLGYQIPANSYGGSLGLFNTTTEYGVVQNHVFMVEFDTFINPEFDPHEHHVGINSNSLKSLTYAWYDINHNNGKKTHALITYNSSTKILNVSWFFNASSTNTLSYEIDLMEILPEYVMVGFSAATGPYNFERNVIHSWNFMSTLESIDSEVNKKKKKKKKKQKMVIVAVASSIFLVLVIGSVYWLTIIIKKRRTKHVRDDNLGGTLVTSDLGKASIPRRFDYRELTAATDGFSEDKRLGRGGSGEVYKGFLKDLGRFVAVKKIFADFQNSEKIFINEVKIISRLIHRNLVQFVGWCHEQREFLLVFEYMPNGSLDTHLFGSRRTLAWDVRYKMALGIATALHYLHEDAEQCVLHRDIKSANILLDTDFSTKLCDFGMAKLVDPRLKTQRTGVVGTYGYLAPEYLNGGRASKESDIYSFGIVALEIACGRKTYQDGEYHIPLVKWVWQLYVEGNILNVADEGLNKNFDELQMTCLLIVGLWCTNPNDKERPKAAQVIKVLQLESPLPELQHDMHDHPLQLTMVKFRNSSQSSPITNSLVNDGR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03788 658 Gene3D Phosphorylase Kinase; domain 1 333 424 - -
Arst6g03788 658 ProSiteProfiles Protein kinase domain profile. 348 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03788 658 Gene3D Transferase(Phosphotransferase) domain 1 425 633 - -
Arst6g03788 658 Pfam Protein kinase domain 349 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03788 658 ProSitePatterns Protein kinases ATP-binding region signature. 354 378 IPR017441 GO:0005524
Arst6g03788 658 FunFam L-type lectin-domain containing receptor kinase IX.1 425 625 - -
Arst6g03788 658 SMART serkin_6 348 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03788 658 CDD lectin_legume_LecRK_Arcelin_ConA 29 260 IPR001220 GO:0030246
Arst6g03788 658 Gene3D - 27 275 - -
Arst6g03788 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Arst6g03788 658 Pfam Legume lectin domain 28 267 IPR001220 GO:0030246
Arst6g03788 658 ProSitePatterns Legume lectins alpha-chain signature. 229 238 IPR000985 -
Arst6g03788 658 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 260 IPR013320 -
Arst6g03788 658 SUPERFAMILY Protein kinase-like (PK-like) 332 631 IPR011009 -
Arst6g03788 658 PANTHER - 45 619 - -
Arst6g03788 658 FunFam L-type lectin-domain containing receptor kinase IX.1 333 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03788 Arst-Chr6 106154103 106156228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03788 12 628 Receptor kinase-like Gene Family AT5G10530 44.076 1.13e-174 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Arst6g03788 Pkinase 8.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03788 - - gmx:102662919 778.089