Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03745 ATGGCAGTGATTAATGAAAAAGATCATCATTTTCCTAAAGGAATGCGTGTTCTTGCTGTTGATGATGACCGAACATGTCTTATGGTTTTGAAGACTTTACTCCAGAAGTGCCATTATCAAGTAACAACCACAAACAGTGCAATAACAGCATTGAAACTATTGAGAGAGAAGAAGAACAAGTTTGATCTGGTAATCAGTGACGTTCACATGCCAGACATGGATGGTTTCAAGCTTCTTGAGCTTGTTGGACTTGAGATGGACTTACCTGTCATAATGTTATCTGTAGATGATGATCCAAGAGTGATGATGAAGGGAATCATGCATGGAGCATGTTTCTATCTGGTGAAACCTGTTAGAATTGAGGAGCTGAAGAATATTTGGCAGCATGTAATTAGGAGGAACAAGCATGATTCCCAGGAGCCAGAAAAACCTAGTAACAACCACGAAAATCCTGATTCGGATCAGAGTTCAAAGGCAAATAAAAAGAGAAAGGAACAAGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGGATGAGAATGACCATGACAACGGTGATGATCCGTCGGCGCAAAAGAAGCCTCGCGTGGTTTGGTCCGTCGACTTGCACCGCAAATTTGTCACTGCCGTCGAGCAATTAGGCATTGACAAGGCTGTACCGAAAAAAATTCTTGACTTAATGAATGTTGAAAAGCTTACAAGGGAGAATGTGGCAAGTCATCTTCAGAAATATAGGATTTTTCTGAGAAGAGTGAACAACATGTCAAACCAACAACACTCTAACATTGGATCAGGCTTCAGCAGTGCAGACACATCATATCTGAGAATGAATCCTCTAAGTGGAATTGGACAATTACAAACACTCAATAATAACTCTGGTTATGGCTTAAGATCTTTTTCACCTTCTAACATGCTTAATAGATTCAACACTCCTTCAGCTCTCAATGCTCATGGTTTCAATTCCAATGATAGCCAATTTCAGTTCCCATCTTCCGGCTTGCTCGGCCGCGGCCGCAGCAATAACAATCAGATTTATCTCCCCGGAGGAGGACTTAATTCTGTTCAAAACTTGAGCACTATCTTTGATTCTAAACAGAGTTTTTGTAGACAGAAACCAAGCTCTCCCATTTTGGGAGTTTCCAACAATGGTTTGATCTTGGAACAGAATCATCAAGGTGGAATCTATGATAATATTCCAAATTCTGTAGGATCTTCTTCCCAAGAACAAATTTCATTCCCTTCTTTACTTGATCATCATCATGGTAATAGTTGCAACAATGATATTTGGTCAAATGAATGCAACACTTTGATGAATTCTTCAACTTTTCAAGGTGGGAATCTTAGTGGTGCTTCATCAATCACTTCACTCTCTAGCCAATCCCATGATTCATTCACTGATTTGAATTTCCAAGGAGTGAATTTCACCAACATTAACAATAGTAACAATGTGCAATTTCAAGGGTGGAATAGTAACAATAATAACAATAATCAGAATGGAAATTACCATGCATTGAGTGGCCTTATTGATCCATTTTCAAATTCAAGCTTCAACAGAAACTTGGACTTTGATTTTTGTGATGCATCGCAAATGAAGCATGATGGGGTTATTGATTTGACTGAAGATTCTTCACTGAAGCCACATCAGTTGTACAAGACTCGGAACACTCACATTTCTAATAATGCTGGTTCCTTGGAAGACTTTGTCAATGAAATTATGAAACAGAAACAAGACAAGATTAAATTACCAGAAGGAGACTTCTTGTGTGACAATTATTCTACTGGTGGAACATCTATGTGA 1797 0.3901 MAVINEKDHHFPKGMRVLAVDDDRTCLMVLKTLLQKCHYQVTTTNSAITALKLLREKKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVDDDPRVMMKGIMHGACFYLVKPVRIEELKNIWQHVIRRNKHDSQEPEKPSNNHENPDSDQSSKANKKRKEQEEEEEEEEEEEDENDHDNGDDPSAQKKPRVVWSVDLHRKFVTAVEQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRIFLRRVNNMSNQQHSNIGSGFSSADTSYLRMNPLSGIGQLQTLNNNSGYGLRSFSPSNMLNRFNTPSALNAHGFNSNDSQFQFPSSGLLGRGRSNNNQIYLPGGGLNSVQNLSTIFDSKQSFCRQKPSSPILGVSNNGLILEQNHQGGIYDNIPNSVGSSSQEQISFPSLLDHHHGNSCNNDIWSNECNTLMNSSTFQGGNLSGASSITSLSSQSHDSFTDLNFQGVNFTNINNSNNVQFQGWNSNNNNNNQNGNYHALSGLIDPFSNSSFNRNLDFDFCDASQMKHDGVIDLTEDSSLKPHQLYKTRNTHISNNAGSLEDFVNEIMKQKQDKIKLPEGDFLCDNYSTGGTSM 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03745 598 Gene3D - 14 151 - -
Arst6g03745 598 SUPERFAMILY CheY-like 13 139 IPR011006 -
Arst6g03745 598 Gene3D - 189 252 - -
Arst6g03745 598 SMART REC_2 15 127 IPR001789 GO:0000160
Arst6g03745 598 ProSiteProfiles Response regulatory domain profile. 16 131 IPR001789 GO:0000160
Arst6g03745 598 MobiDBLite consensus disorder prediction 134 195 - -
Arst6g03745 598 Pfam Myb-like DNA-binding domain 195 245 IPR001005 -
Arst6g03745 598 Pfam Response regulator receiver domain 17 125 IPR001789 GO:0000160
Arst6g03745 598 SUPERFAMILY Homeodomain-like 191 250 IPR009057 -
Arst6g03745 598 MobiDBLite consensus disorder prediction 168 184 - -
Arst6g03745 598 NCBIfam myb-like DNA-binding domain, SHAQKYF class 193 246 IPR006447 GO:0003677
Arst6g03745 598 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 190 249 IPR017930 -
Arst6g03745 598 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 256 IPR045279 GO:0009736
Arst6g03745 598 MobiDBLite consensus disorder prediction 134 167 - -
Arst6g03745 598 CDD REC_typeB_ARR-like 17 131 - -
Arst6g03745 598 FunFam Two-component response regulator 189 252 - -
Arst6g03745 598 Coils Coil 154 184 - -
Arst6g03745 598 PIRSF RR_ARR_type-B 1 595 IPR017053 GO:0003677|GO:0003700|GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03745 Arst-Chr6 105613135 105616761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03745 11 321 Response Regulator Gene Family AT2G25180 54.799 5.05e-107 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Arst6g03745 Response_reg 2.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03745 - K14491 adu:110273068 1137.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03745 6 105613135 105616761 Arst10g02342 10 83224430 83227836 PCT