Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03736 ATGGCAAGATCACAACAGAGATACCGAGGTGTGAGACAAAGGCACTGGGGTTCTTGGGTCTCTGAAATTCGCCACCCCATTTTGAAGACAAGGATATGGCTTGGAACATTTGAGACAGCTGAGGATGCTGCTAGAGCCTATGATGAAGCAGCTAGGCTTATGTGTGGTGCAAGAGCAAGAACCAATTTCCCTTTCAACCCTAACACCACCAACAACGTCTCTCAATCTTCTTCTTCAAAGCTTCTCTCACCAACTTTGACCGCAAAATTGCACAGATGCTACATGGCTTCTTTGCAATTAACTCGCCAACAAGATCCTCAAAGGGTACTAGTGCCCAATCATAATGATAATCATAATAATAGTAACTACTCCAAAGTGCAAATTAGTGAAAAGGGTGATTCAATTGTGTCATCAAAAAAGAGAACACATGATGAGGAGGAGGAAGAGGTGAAACAAGATTCAGAGGCCAATTGGGTTGTCAAGAAAGTTAAGGGTATGGACCAAATTGGTCCACAGTTCAAGCCACTTGAAGAACATCACATTGACCAAATGATTGAGGAGCTTCTTCATTATGGCTCTATTGAACTTTGTTCTGTTTTTCCACATCAACATATTTAA 618 0.4159 MARSQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGARARTNFPFNPNTTNNVSQSSSSKLLSPTLTAKLHRCYMASLQLTRQQDPQRVLVPNHNDNHNNSNYSKVQISEKGDSIVSSKKRTHDEEEEEVKQDSEANWVVKKVKGMDQIGPQFKPLEEHHIDQMIEELLHYGSIELCSVFPHQHI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03736 205 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 139 - -
Arst6g03736 205 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Arst6g03736 205 MobiDBLite consensus disorder prediction 134 154 - -
Arst6g03736 205 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Arst6g03736 205 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Arst6g03736 205 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Arst6g03736 205 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Arst6g03736 205 MobiDBLite consensus disorder prediction 113 154 - -
Arst6g03736 205 MobiDBLite consensus disorder prediction 113 133 - -
Arst6g03736 205 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Arst6g03736 205 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Arst6g03736 205 FunFam Ethylene-responsive transcription factor 2 6 66 - -
Arst6g03736 205 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03736 Arst-Chr6 105479587 105480539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03736 1 205 AP2-EREBP Transcription Factor Family AT5G25190 58.537 4.40e-73 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst6g03736 AP2 6.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03736 - - aip:107605402 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03736 6 105479587 105480539 Arst10g02330 10 82729925 82747368 PCT