LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst6g03700	ATGGCCAACTATAGTTTTCTTCTTTTCTTATATGCCTATTTCATCGTGAAATCCTTAGTAACTATTGCTAATGATGCTAATAGAAATCTTCACATTGTATACATGGGATCACTCCCAAAGTATAATTATTCTCCAACATCCCACCATCTTAGTATGCTGCAACAAACTACTAATCATAATGATGCAACAATTCATATGGTTAGAAGTTATCATAAGAGTTTTAATGGTTTTGCTGCAATGATCACCAACCAAGAAAGAGAAAAGCTAAAAAAAATGGAAGGAGTGGTTTCTGTTTTCCCAAGCAAATCACTCAAACTTCACACTACAAGGTCTTGGGACTTCATGGGATTCAAAGAATCGATACATAGAAACAAAACTGGTGAGAGTGATGTTATAATCGGAGTTATAGACACCGGAATCTGGCCGGAGTCAGAGAGCTTCAACGATCATGGTTTCGGTCCAATTCCCAAAAAATGGAAAGGTGCATGCAAAGGTGGTAAAAACTTCAGATGCAACAAAAAAATAATCGGTGCAAGATACTATCTAAAAGATCAACCTTCAACAAGAGACATTGTTGGGCATGGAAGCCACACAGCATCAATTGCAGCAGGGAATAAAGTTGTGGGAGCAAGCTTTTATGGAATCGCCGAAGGAGCTGCAAGAGGAGGTGTCCCATCGGCAAGAATTGCTGCTTATAGTGTGTGTAGTGAACAAGGATGCACAGATGATGCCATATTGGCTGCTTTTGATGATGCCATTGCCGATGGTGTGGATCTTATCACAATTTCAATTGGGGCAGATGAGCAAATGTCCTTTGATAAAGACATCATAGCAATTGGATCTTTTCATGCAATGGAAAAAGGGATCCTCACTATACACTCTGCAGGTAACAATGGCCCTAACATTGTAACATTTAGTGTATCACCTTGGTTATTCACTGTTGCAGCTACTACTATGGATCGTAGACTAATTGATAACGTTTTGCTTGGCAATGGATTAATGATTTCGGGGAAGTCAATAAATGGGTTTGCATCAAATGGGACAAAGATTCCATTGATCCATGGAAAGTTTGCTTCAAGTCCAACATGTCCATCAGAGAAAGATGCCGAATTTTGTTTTTGTTTGGACCCCAAACGCATAAAGGGAAAAATTGTCTTGTGTAGAACTTCATTTGGTTATTCAGCGGGTCTTGAATTGGGTGCATTTGGCTCAATTGCAATCTCTTACGAATATGAAGCTCAAGTAGTTTCTTATCCTGCAGTAGGCATAGATCCAGAGGTTTATGATGTTGTTTTGTCTTACGCAAATTCCACTACCACCCCTAGTGCTGAAATACTGAGTAGTGCAGGCTTTATAAACAATAGTGCTCCAATTGTTGCTGAATTCTCTTCTGTAGGACCCAATATGCAAATCAAAGAAATTATGAAGCCAGACATAAGTGCTCCGGGTATAGAAATTTTGGCTGCTTACTCACCTCTTGCACCACCTTCTCCTGATAAAAGAGATAAAAGATCTGTGAAATACAACATACTCTCTGGAACCTCAATGTCATGCCCCCATGTTGCTGGTGCAGCTGCATATGTTAAGACTTTTCATCCTGATTGGTCTCCGGCAGCTATAAAGTCTTCTCTTATGACCACTGCAAAACCAATGAATGGAAGTGAACTCGCAGAATTCTCCTATGGATCAGGGTTTTTGGACCCAGTTAGAGCCATAAATCCTGGTCTAGTTTTTGATGCTTCCAAAGATGACTATGTGAATTTGCTTTGCAGAATTGGGTATGATACAATGGAAGTTCGAAAAATCTCAGGAGACAAAAGTGTTTGCTCTTCATCATCTCTGCCAATGGCAAAAGATTTTAATTATCCTGCAATTGTGGCTGAGATTGAACCAATGAAACCATTCATGATTAATTTCACAAGAACAGTTACAAATGTTGGATTTGCTAACTCTACCTATAAGGCTTACATCCAACAACATTCTGGCATCAACATCACTGTTGTGCCTAACATACTTAAGTTTAAATGTCTCAAGGAGAAACAATCTTTTGTTGTTCATGTTGTTGGAGAAAAATTTAGTGACTTTAGTTTAGTTTCATCGTCACTGTCATGGACCGATGGAACACATAGTGTAAGGTGTCCACTTATTTTACGTGTTATAAAAGTAGGAGCATGA	2175	0.3899	MANYSFLLFLYAYFIVKSLVTIANDANRNLHIVYMGSLPKYNYSPTSHHLSMLQQTTNHNDATIHMVRSYHKSFNGFAAMITNQEREKLKKMEGVVSVFPSKSLKLHTTRSWDFMGFKESIHRNKTGESDVIIGVIDTGIWPESESFNDHGFGPIPKKWKGACKGGKNFRCNKKIIGARYYLKDQPSTRDIVGHGSHTASIAAGNKVVGASFYGIAEGAARGGVPSARIAAYSVCSEQGCTDDAILAAFDDAIADGVDLITISIGADEQMSFDKDIIAIGSFHAMEKGILTIHSAGNNGPNIVTFSVSPWLFTVAATTMDRRLIDNVLLGNGLMISGKSINGFASNGTKIPLIHGKFASSPTCPSEKDAEFCFCLDPKRIKGKIVLCRTSFGYSAGLELGAFGSIAISYEYEAQVVSYPAVGIDPEVYDVVLSYANSTTTPSAEILSSAGFINNSAPIVAEFSSVGPNMQIKEIMKPDISAPGIEILAAYSPLAPPSPDKRDKRSVKYNILSGTSMSCPHVAGAAAYVKTFHPDWSPAAIKSSLMTTAKPMNGSELAEFSYGSGFLDPVRAINPGLVFDASKDDYVNLLCRIGYDTMEVRKISGDKSVCSSSSLPMAKDFNYPAIVAEIEPMKPFMINFTRTVTNVGFANSTYKAYIQQHSGINITVVPNILKFKCLKEKQSFVVHVVGEKFSDFSLVSSSLSWTDGTHSVRCPLILRVIKVGA	724

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst6g03700	724	CDD	Peptidases_S8_3	104	548	IPR034197	-
	Arst6g03700	724	ProSitePatterns	Serine proteases, subtilase family, serine active site.	513	523	IPR023828	-
	Arst6g03700	724	Pfam	Peptidase inhibitor I9	31	107	IPR010259	-
	Arst6g03700	724	Gene3D	-	320	452	-	-
	Arst6g03700	724	SUPERFAMILY	Subtilisin-like	111	573	IPR036852	GO:0004252\|GO:0006508
	Arst6g03700	724	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	16	107	IPR037045	-
	Arst6g03700	724	CDD	PA_subtilisin_like	326	445	-	-
	Arst6g03700	724	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	32	715	IPR045051	-
	Arst6g03700	724	PRINTS	Subtilisin serine protease family (S8) signature	128	147	IPR015500	-
	Arst6g03700	724	PRINTS	Subtilisin serine protease family (S8) signature	512	528	IPR015500	-
	Arst6g03700	724	PRINTS	Subtilisin serine protease family (S8) signature	190	203	IPR015500	-
	Arst6g03700	724	Pfam	Subtilase family	129	564	IPR000209	GO:0006508\|GO:0008236
	Arst6g03700	724	Gene3D	Peptidase S8/S53 domain	130	585	IPR036852	GO:0004252\|GO:0006508
	Arst6g03700	724	ProSiteProfiles	Serine proteases, subtilase domain profile.	111	572	-	-
	Arst6g03700	724	Pfam	Fibronectin type-III domain	619	716	IPR041469	-
	Arst6g03700	724	Gene3D	-	589	720	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst6g03700	Arst-Chr6	104989252	104991426	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst6g03700	3	717	Subtilisin-like Serine Gene Family	AT3G46850	53.270	0.0	741

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst6g03700	-		-	qsa:O6P43_020998	783.867