Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03614 ATGTCTCAAACTAACTGGGAGGCTGATAAGATGTTAGATGTTTACATCCATGATTACCTTGTGAAGAGGGACTTGAAGGCTTCAGCTCAGGCTTTTCAAGCTGAAGGGAAAGTATCCTCGGACCCCGTTGCTATCGATGCTCCCGGAGGATTTCTATTCGAGTGGTGGTCGGTTTTCTGGGACATATTTATTGCCAGGACTAATGAGAAGCACTCAGAGGTTGCCGCCTCGTATATTGAGACACAATTAATTAAGGCTAGGGAACAACAGCAGCAGCAACAGCAGCCGCAGCCACAACCCCAGCAGTCACAACATCAACATCAACAGCAGCAGCAGCAGCAACAACACCACATGCAGATGCAACAGCTCCTGTTGCAGAGGCAGGCCCAGCAGCAGCAGCAACAACAACAACAACAGCAGCAGCAGCAGCCGCAGCAACAGCAGCAACAACAGCAGCCACAGCAGCAGCAACAGCAGCAACCACCCCAACAACAACAGGGTAGGGATAGGGCTCATCTCTTGAATGGGGGTACCAATGGGTTAGTTGGAAACCCTGGCACTGCTAATGCAATGGCAACAAAGATGATCGAGGACAGGTTAAAACTGCCCCTTCAGAGGGATTCTTTGGATGAAGCAGCAATGAAGCAAAGATTCGGAGACCAACTCATGGACCCAAATCATGCCTCAATATTGAAGTCATCTGCAGCTCCGGGCCAGCCTTCAGGGCAAGTTTTGCATGGTGCTGCTGGTGCGATGTCTCCACAAGTTCAAGGTCGAAGTCAGCAATTACCAGGGTCTACTCCGGACATTAAGAGTGAGATTAATCCTGTTTTAAATCCCAGAGCTGCGGGGCCTGAAGGATCACTAATAGGAATGCCTGGATCAAATCAAGGCAGCAACAATTTGACTTTGAAGGGGTGGCCACTCACAGGGTTGGAGCAATTACGGTCTGGTCTACTTCAGCAGCAAAAACCTTTCATGCAAGCCCCACAGCCTTTTCATCAGCTTCCAATGTTGACACCCCAGCATCAGCAACATCTTATGTTACAAGCACAACAAAATCTGGCATCACCATCTGCTAGTGATGATAGTAGAAGACTCAGAATGCTGATGAATAATAGGAACATGGGGTTAAGTAAGGATGGTCTTTCAAATCCGGTGGGGGATGTACCAAATGTTGGATCACCACTTCCAGGTGGTGGTCCCCCGTTTCCTCGTGGAGATACAGATATGTTAATGAAGTTGAGACTCGCTCAGTTACACCAGCAGCATCAAAATGCCAATCCACAGCAGCAGCAGCAGCTTCAACAGCATGCTCTTTCAAATCAGCAATCCCAGAGTTCAAATCATGGCATGCATCAACAAGACAGAGTAGCAGGAGCTGGCAGTGTCACTGCGGATGGAAGCATGTCAAACTCCTTTAGAGGAAATGATCAGGTTTCAAAAAACCAGACTGGGAGAAAGAGAAAGCAGCCTGTATCTTCTTCTGGACCTGCCAATAGCTCAGGAACAGCAAATACGGCAGGCCCATCTCCAAGTTCAGCGCCATCAACTCCCTCCACTCATACACCTGGTGATGTGATGTCAATGCCTGCATTACCTCATAGTAGTAGTTCAACAAAGCCTCTAATGATGTTTGGTACCGATGGCACCGGAACTCTTACATCACCCTCAAACCAGTTGGCTGACGTGGATCGTTTTGTGGAGGATGGATCTCTTGATGACAATGTTGAGTCTTTTTTATCCCATGATGATACAGATGCTAGAGATGCAGTTGGTCGTTGTATGGATGTAAGCAAAGGTTTCACATTTTCTGAAGTAAACTCAGTACGTGCAAGCACAAGCAAGGTCGTCTGTTGCCATTTCTCATCTGATGGGAAATTGCTTGCAAGTGGTGGACATGACAAGAAGGCTGTTTTATGGTACACAGATTCTCTGAAGCAGAAAACTACCCTTGAAGAGCATTCATCGTTAATCACTGATGTCCGGTTTAGCCCAAGCATGCCTCGCCTTGCAACATCTTCATTTGACAAAACTGTCAGAGTTTGGGATGTTGACAATCCGGGGTATTCTCTTCGCACCTTTACTGGACATTCAACATCAGTTATGTCTCTAGATTTTCACCCGAATAAGGATGACCTTATCTGCTCTTGTGATGGTGACGGTGAGATACGATATTGGAGCATAAACAATGGCAGTTGTGCTAGAGTTGCAAAGGGTGGGACTGTGCAGATGAGATTTCAACCTCGACTCGGGAGGTACCTTGCTGCGGCTGCAGAGAATGTCGTATCTATACTTGATGTGGAGACACAAGCATGCCCATATTCGTTAAAGGGACACACGAAGCCGATACATTCCGTGTGTTGGGACCCATCTGGGGAGTTCCTTGCATCTGTCAGTGAGGACTCTGTAAGGGTTTGGACTCTTGGAACAGGAACTGAGGGCGAATGTGTTCACGAGCTTAGCTGTAACGGCAACAAGTTCCACTCGTGTGTTTTCCACCCAACGTATTCTTCGCTGCTCGTCATTGGTTGTTATCAGTCGTTGGAGCTGTGGAACATGTCAGAGAACAAGACAATGACTCTGTCTGCTCATGAAGGTCTGGTCGCCGCGTTGGCAGTTTCAACTGTAAATGGTTTGGTTGCTTCAGCGAGTCATGACAAGTATGTCAAGCTCTGGAAATAA 2685 0.4749 MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQLIKAREQQQQQQQPQPQPQQSQHQHQQQQQQQQHHMQMQQLLLQRQAQQQQQQQQQQQQQQPQQQQQQQQPQQQQQQQPPQQQQGRDRAHLLNGGTNGLVGNPGTANAMATKMIEDRLKLPLQRDSLDEAAMKQRFGDQLMDPNHASILKSSAAPGQPSGQVLHGAAGAMSPQVQGRSQQLPGSTPDIKSEINPVLNPRAAGPEGSLIGMPGSNQGSNNLTLKGWPLTGLEQLRSGLLQQQKPFMQAPQPFHQLPMLTPQHQQHLMLQAQQNLASPSASDDSRRLRMLMNNRNMGLSKDGLSNPVGDVPNVGSPLPGGGPPFPRGDTDMLMKLRLAQLHQQHQNANPQQQQQLQQHALSNQQSQSSNHGMHQQDRVAGAGSVTADGSMSNSFRGNDQVSKNQTGRKRKQPVSSSGPANSSGTANTAGPSPSSAPSTPSTHTPGDVMSMPALPHSSSSTKPLMMFGTDGTGTLTSPSNQLADVDRFVEDGSLDDNVESFLSHDDTDARDAVGRCMDVSKGFTFSEVNSVRASTSKVVCCHFSSDGKLLASGGHDKKAVLWYTDSLKQKTTLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDVDNPGYSLRTFTGHSTSVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCARVAKGGTVQMRFQPRLGRYLAAAAENVVSILDVETQACPYSLKGHTKPIHSVCWDPSGEFLASVSEDSVRVWTLGTGTEGECVHELSCNGNKFHSCVFHPTYSSLLVIGCYQSLELWNMSENKTMTLSAHEGLVAALAVSTVNGLVASASHDKYVKLWK 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03614 894 MobiDBLite consensus disorder prediction 146 172 - -
Arst6g03614 894 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 652 687 - -
Arst6g03614 894 Coils Coil 120 140 - -
Arst6g03614 894 MobiDBLite consensus disorder prediction 422 454 - -
Arst6g03614 894 FunFam Transcriptional corepressor LEUNIG 741 894 - -
Arst6g03614 894 ProSiteProfiles Trp-Asp (WD) repeats profile. 652 687 IPR001680 GO:0005515
Arst6g03614 894 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 862 894 - -
Arst6g03614 894 ProSiteProfiles Trp-Asp (WD) repeats profile. 777 809 IPR001680 GO:0005515
Arst6g03614 894 ProSiteProfiles Trp-Asp (WD) repeats profile. 862 894 IPR001680 GO:0005515
Arst6g03614 894 PANTHER TRANSCRIPTION ACTIVATOR MSS11 2 894 - -
Arst6g03614 894 MobiDBLite consensus disorder prediction 422 541 - -
Arst6g03614 894 PANTHER TRANSCRIPTION ACTIVATOR MSS11 2 894 - -
Arst6g03614 894 SMART Lish 8 40 IPR006594 GO:0005515
Arst6g03614 894 ProSiteProfiles Trp-Asp (WD) repeats profile. 610 651 IPR001680 GO:0005515
Arst6g03614 894 Pfam WD domain, G-beta repeat 610 641 IPR001680 GO:0005515
Arst6g03614 894 Pfam WD domain, G-beta repeat 857 894 IPR001680 GO:0005515
Arst6g03614 894 Pfam WD domain, G-beta repeat 691 728 IPR001680 GO:0005515
Arst6g03614 894 Pfam WD domain, G-beta repeat 649 684 IPR001680 GO:0005515
Arst6g03614 894 Pfam WD domain, G-beta repeat 773 807 IPR001680 GO:0005515
Arst6g03614 894 SUPERFAMILY WD40 repeat-like 604 894 IPR036322 GO:0005515
Arst6g03614 894 CDD WD40 606 894 - -
Arst6g03614 894 SMART WD40_4 814 853 IPR001680 GO:0005515
Arst6g03614 894 SMART WD40_4 645 684 IPR001680 GO:0005515
Arst6g03614 894 SMART WD40_4 855 894 IPR001680 GO:0005515
Arst6g03614 894 SMART WD40_4 688 728 IPR001680 GO:0005515
Arst6g03614 894 SMART WD40_4 770 808 IPR001680 GO:0005515
Arst6g03614 894 SMART WD40_4 603 642 IPR001680 GO:0005515
Arst6g03614 894 Gene3D - 586 740 IPR015943 GO:0005515
Arst6g03614 894 ProSiteProfiles Trp-Asp (WD) repeats profile. 695 737 IPR001680 GO:0005515
Arst6g03614 894 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 695 733 - -
Arst6g03614 894 MobiDBLite consensus disorder prediction 376 409 - -
Arst6g03614 894 FunFam Transcriptional corepressor LEUNIG 589 740 - -
Arst6g03614 894 ProSitePatterns Trp-Asp (WD) repeats signature. 671 685 IPR019775 -
Arst6g03614 894 ProSiteProfiles LIS1 homology (LisH) motif profile. 8 40 IPR006594 GO:0005515
Arst6g03614 894 MobiDBLite consensus disorder prediction 146 188 - -
Arst6g03614 894 Pfam LisH 10 36 IPR006594 GO:0005515
Arst6g03614 894 MobiDBLite consensus disorder prediction 465 525 - -
Arst6g03614 894 Gene3D - 741 894 IPR015943 GO:0005515
Arst6g03614 894 MobiDBLite consensus disorder prediction 234 267 - -
Arst6g03614 894 MobiDBLite consensus disorder prediction 87 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03614 Arst-Chr6 103973168 103983114 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03614 655 854 Miscellaneous Gene Families AT5G08390 26.570 3.76e-16 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Arst6g03614 WD40 0.032 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03614 - - aip:107605121 1357.81