Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03601 ATGCACGTTCTCGCACCAGAAGTGCATATTGAAGGTCCACCTGACACATCTCCGTTGTTGATGGAGCGGCTGGGTAGCTTGAACAGCAATCAGCATATGATCGTGCAGCCGGAGAGGTTGAATGACAATCAGCATATCATAGACATTAACATAGCTGGAAACGGTGATGCTTCCACTTCAGGCTCAGCTCATGATAGACATTCTAATGGTGTGGATACATCACAGCATGTAGAGAGAGCGGGCAGTGTGAGAGTACCTGTTTCGCAGCCTTCGGTTTTATCCAACAATGGATCCAATGGATCAAACTCCAGGAATTCTTCCTTCATCAGACGTGGAGATTCACGCCGGAGTAGGAGTCCAGTGCATTCGGGGTTGTGGATATCTGTAGAACTAGCACTCTTAGTAAGTCAAATTGTTGCATCAATTGTTGTATTGTCTTTGTCAAGGCACGAGCATCCACGTTCCCCATTGTTTGCGTGGATTGTGGGTTATGCAAGTGGTTGTCTTGCTACCCTACCTCTGCTTTATTGGCGGTATTATCATCATAACCAAAGTCGAGATCAAGATTCACCCCAAACTCGTCAAACATCTCCTCGGGTTAATGATCCTTCAGGGACATTTCATTCCAGTTCCAGAAGTAATGGAGGAGCAGATGGTCAAGGTGCTGCTTCAATGTCCAGAGGCAATCAAGCTTCACCATTGACAAACAGAAGAATGAAGACACTAGTGGAATACTTCAAAATATCTTTAGATTGCTTTTTTGCTATATGGTTCGTTGTTGGAAATGTATGGATCTTTGGAGGACGTTCGTCTGCTGATGAAGCTCCTAACTTGTATAGGTTATGTATAGTGTTTCTCGCCTTTAGCTGTATTGGTTATGCTATGCCCTTCATTCTCTGTTCAACAATCTGCTGTTGTCTCCCTTGTATTATCTCCATCCTTGGCGTTAGAGAGGATATGTCACAAAACAGAGGGGCAACTTCTGAATCCATAAATGCCCTGCCAACTTACAAGTTCAAGATGAAGAAAAATAAAAGAAGTGGCGACAGTAACTCAGCTGCTGTTGATGGGGGAGTTGTGGCTGCAGGAACTGAAAAGGAGCGAGTGATATCTGGAGATGATGCAGTTTGCTGCATCTGCCTGGCAAAGTATGAAAATAATGATGAGCTGCGAGAATTGCCTTGTTCTCATCTTTTTCACAAAGAGTGTGTAGACAAGTGGTTAAAGATAAATGCATTGTGCCCTCTTTGCAAGAGTGAGGTTGGTGAGAACTTAACCGGATCGGGTGCCGCAGAAGGTGCCAGCCAATAG 1311 0.4455 MHVLAPEVHIEGPPDTSPLLMERLGSLNSNQHMIVQPERLNDNQHIIDINIAGNGDASTSGSAHDRHSNGVDTSQHVERAGSVRVPVSQPSVLSNNGSNGSNSRNSSFIRRGDSRRSRSPVHSGLWISVELALLVSQIVASIVVLSLSRHEHPRSPLFAWIVGYASGCLATLPLLYWRYYHHNQSRDQDSPQTRQTSPRVNDPSGTFHSSSRSNGGADGQGAASMSRGNQASPLTNRRMKTLVEYFKISLDCFFAIWFVVGNVWIFGGRSSADEAPNLYRLCIVFLAFSCIGYAMPFILCSTICCCLPCIISILGVREDMSQNRGATSESINALPTYKFKMKKNKRSGDSNSAAVDGGVVAAGTEKERVISGDDAVCCICLAKYENNDELRELPCSHLFHKECVDKWLKINALCPLCKSEVGENLTGSGAAEGASQ 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03601 436 MobiDBLite consensus disorder prediction 87 108 - -
Arst6g03601 436 MobiDBLite consensus disorder prediction 189 232 - -
Arst6g03601 436 ProSiteProfiles Zinc finger RING-type profile. 377 418 IPR001841 -
Arst6g03601 436 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 38 421 - -
Arst6g03601 436 Pfam Ring finger domain 377 418 IPR001841 -
Arst6g03601 436 SMART ring_2 377 417 IPR001841 -
Arst6g03601 436 MobiDBLite consensus disorder prediction 81 120 - -
Arst6g03601 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 358 426 IPR013083 -
Arst6g03601 436 FunFam E3 ubiquitin-protein ligase 360 426 - -
Arst6g03601 436 SUPERFAMILY RING/U-box 369 424 - -
Arst6g03601 436 MobiDBLite consensus disorder prediction 185 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03601 Arst-Chr6 103846190 103851131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03601 110 428 C3H Transcription Factor Family AT1G80400 57.099 5.69e-138 400