Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03595 ATGGGAGAGGTGGCAGTAATGCGCTCTGAGCCACTGCAGTTTGAGTGCAATGATATGAAGCATCTGACAGAGGGAGACGCTTATGCCACAGAATCAAATGCAGAGATTGATCATAGGGAAGAATCAAGCCAATCAACTGATCATGAAAAGACTAATGACTTGCGTGAGAAAGGATACATGGAGTACGGATGTCAACATTATCGGAGAAGATGCTGTATCAGGGCCCCTTGTTGCAATGAGGTTTTTGATTGCCGCCACTGTCACAATGAGGCAAAAAATGATATCAGCATTGACCAGAAACTTAGACATGACATTCCGCGCCACCAAGTCAAACAGGTGATATGTTCACTTTGTGGGACAGAACAAGAGGTGCAGCAGAACTGTATCAATTGTGGTGTACCCTTCTTTCCCTTTTCTTTTTCATGTTTAATTTACCCCATAAGACTTCTGCTTTAATACTGTTTTACCGTCTTATATCTGTTTTTCTTCCATTTGAAGCAGGTATCAAAGCAACAATATCATTGCGATGGATGTGGAATTTGCAGAACTGGAGGACGTGAGAATTTCTTCCACTGCTACAAGTGTGGTTGTTGCTATTCAATCCTGCTAAAAGATAGTCACCCTTGCATTGAAGGAGCAATGCATCATGATTGCCCCGTTTGTTTTGAGTATTTGTTTGAATCCAGAAATGATGTCACTGTTATGCCCTGTGGACATACAATCCATAAGAGCTGCTTGGATGAAATGAGAGAACATTACAAATATGCATGCCCTCTGTGCTCAAAGTCGGTGTGCGATATGTCGAAGGTTTGGGAGAAATTTGACTTGGAGATGGCTGCTATACCGATACCTGAACCATATCAGAATAAAATGGTTTGGATCTTGTGCAATGATTGTTGCAAAACATCTCGAGTTCAGTTCCATTTTGTGGCTCAAAAATGTTTGAACTGCAAATCCTACAACACACGACAGACCCGAGGCCGAGACTGCTGA 993 0.422 MGEVAVMRSEPLQFECNDMKHLTEGDAYATESNAEIDHREESSQSTDHEKTNDLREKGYMEYGCQHYRRRCCIRAPCCNEVFDCRHCHNEAKNDISIDQKLRHDIPRHQVKQVICSLCGTEQEVQQNCINCGVPFFPFSFSCLIYPIRLLLXYCFTVLYLFFFHLKQVSKQQYHCDGCGICRTGGRENFFHCYKCGCCYSILLKDSHPCIEGAMHHDCPVCFEYLFESRNDVTVMPCGHTIHKSCLDEMREHYKYACPLCSKSVCDMSKVWEKFDLEMAAIPIPEPYQNKMVWILCNDCCKTSRVQFHFVAQKCLNCKSYNTRQTRGRDC 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03595 330 CDD RING-H2_Pirh2-like 217 261 - -
Arst6g03595 330 Gene3D - 289 330 - -
Arst6g03595 330 ProSiteProfiles Zinc finger CHY-type profile. 57 133 IPR008913 GO:0008270
Arst6g03595 330 SUPERFAMILY RING/U-box 217 266 - -
Arst6g03595 330 ProSiteProfiles Zinc finger RING-type profile. 218 261 IPR001841 -
Arst6g03595 330 Pfam Zinc-ribbon 265 323 IPR039512 -
Arst6g03595 330 SMART ring_2 218 260 IPR001841 -
Arst6g03595 330 ProSiteProfiles Zinc finger CTCHY-type profile. 150 217 IPR017921 -
Arst6g03595 330 Pfam CHY zinc finger 64 145 IPR008913 GO:0008270
Arst6g03595 330 Pfam Ring finger domain 217 260 IPR001841 -
Arst6g03595 330 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 36 326 - -
Arst6g03595 330 MobiDBLite consensus disorder prediction 31 52 - -
Arst6g03595 330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 212 263 IPR013083 -
Arst6g03595 330 SUPERFAMILY CHY zinc finger-like 61 135 IPR037274 GO:0008270
Arst6g03595 330 SUPERFAMILY Zinc hairpin stack 167 211 IPR037275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03595 Arst-Chr6 103772568 103777993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03595 62 323 C2H2 Transcription Factor Family AT3G18290 36.364 1.83e-43 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03595 K10144 - gmx:100803569 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03595 6 103772568 103777993 Arst8g03369 8 44609036 44615358 PCT