Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03560 ATGACTGCTTTCAACTCCTTCAGATCGTCCAAATTGGTCTCATGGAAATCTACCGGCAGGCTTCAGCAAACCCTAGCGAATTGCATAGAGCGGAGGGGCAAGGCTTTGCATTCAGGAAAGGGTTCGACAGTGCGATTGTGCCCTGGGTTCGCCGGCGAAGGAAGGTACTTTGATTATCGGAGCAATTTGATTCCGGCATCTATTGATTTTGTTCAGGTGTCGCCTCTCTGTACGACTCTCTGTAAAAATGGTTTCCGTGTTCGAACCGTAGAGCACTTACTTTCTGCATTGGAGGCTGCTGGAGTTGATAATTGCAGAATTGAGATTGAGAATTTGGATGCTGAAGAGCGTGATGCTGAGATTCCTATATTTGATGGATCAGCAAGAGAATGGGTTGAAGCAGTGGATGAAGTTGGTTTAAAGGTGGCAACAACCCGGGATGGCAAACATTGTGAGAAAATGGCAGCACATGTGAATGAACCGGTGTATGTTTGGAGGGATGATTCTTTTGTTTCTGCATTTCCTTCAAACGTGGTTAAGATAAGTTATGGCATCAGCTTTCTACAGGCACCAGCTATAGGCTCCCAGTGGTTTTCTACACCATCTGTGGACAATTTGTTTTATACCAGACAGATCGCTTTGGCAAGAACTTTCTGTATTTATGAGGAGATTGAGCAAATGCGCAATGTTGGACTAATCAAGGGGGGTTCTCTGGAAAATGCCATTGTATGCTGTACCAGTAAAGGTTGGTTGAACCCACCTCTGCGTTTTAATGATGAACCATGCCGCCACAAGGTCTTAGATCTTATTGGTGATCTTTCACTTTTTGCTCAGTTTGGGAATCAAGGACTTCCAGTGGCACACATTGTAGCTTACAAGGGTGGCCATGCTTTGCATGCTGGTTTGGCACGCCAGTTAATGGGTGAGTGA 930 0.4538 MTAFNSFRSSKLVSWKSTGRLQQTLANCIERRGKALHSGKGSTVRLCPGFAGEGRYFDYRSNLIPASIDFVQVSPLCTTLCKNGFRVRTVEHLLSALEAAGVDNCRIEIENLDAEERDAEIPIFDGSAREWVEAVDEVGLKVATTRDGKHCEKMAAHVNEPVYVWRDDSFVSAFPSNVVKISYGISFLQAPAIGSQWFSTPSVDNLFYTRQIALARTFCIYEEIEQMRNVGLIKGGSLENAIVCCTSKGWLNPPLRFNDEPCRHKVLDLIGDLSLFAQFGNQGLPVAHIVAYKGGHALHAGLARQLMGE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03560 309 Gene3D lpxc deacetylase, domain 1 20 147 IPR015870 GO:0008759|GO:0009245
Arst6g03560 309 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 2 307 IPR004463 GO:0008759|GO:0009245
Arst6g03560 309 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 22 307 IPR004463 GO:0008759|GO:0009245
Arst6g03560 309 SUPERFAMILY Ribosomal protein S5 domain 2-like 21 141 IPR020568 -
Arst6g03560 309 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 22 307 IPR004463 GO:0008759|GO:0009245
Arst6g03560 309 Gene3D lpxc deacetylase, domain 2 156 309 IPR011334 GO:0008759|GO:0009245
Arst6g03560 309 SUPERFAMILY Ribosomal protein S5 domain 2-like 160 307 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03560 Arst-Chr6 103508185 103512105 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03560 4 306 Carbohydrate Esterase AT1G25054 61.716 8.73e-141 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03560 K02535 - gmx:100814465 505.368