Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03558 ATGACTGCTTTCAACTCCTTCAGATCGTCCAAATTGGTCTCATGGAAATCTACCGGCAGGCTTCAGCAAACCCTAGCGAATTGCATAGAGCGGAGGGGCAAGGCTTTGCATTCAGGAAAGGGTTCGACAGTGCGATTGTGCCCTGGGTTCGCCGGCGAAGGAAGGTACTTTGATTATCGGAGCAATTTGATTCCGGCATCTATTGATTTTGTTCAGGTGTCGCCTCTCTGTACGACTCTCTGTAAAAATGGTTTCCGTGTTCGAACCGTAGAGCACTTACTTTCTGCATTGGAGGCTGCTGGAGTTGATAATTGCAGAATTGAGATTGAGAATTTGGATGCTGAAGAGCGTGATGCTGAGCAGATTCCTATATTTGATGGATCAGCAAGAGAATGGGTTGAAGCAGTGGATGAAGTTGGTTTAAAGGTGGCAACAACCCGGGATGGCAAACATTGTGAGAAAATGGCAGCACATGTGAATGAACCGGTGTATGTTTGGAGGGATGATTCTTTTGTTTCTGCATTTCCTTCAAACGTGGTTAAGATAAGTTATGGCATCAGCTTTCTACAGGCACCAGCTATAGGCTCCCAGTGGTTTTCTACACCATCTGTGGACAATTTGTTTTATACCAGACAGATCGCTTTGGCAAGAACTTTCTGTATTTATGAGGAGATTGAGCAAATGCGCAATGTTGGACTAATCAAGGGGGGTTCTCTGGAAAATGCCATTGTATGCTGTACCAGTAAAGGTTGGTTGAACCCACCTCTGCGTTTTAATGATGAACCATGCCGCCACAAGGTCTTAGATCTTATTGGTGATCTTTCACTTTTTGCTCAGTTTGGGAATCAAGGACTTCCAGTGGCACACATTGTAGCTTACAAGGGTGGCCATGCTTTGCATGCTGGTTTGGCACGCCAGTTAATGGGTGAGTGA 933 0.4544 MTAFNSFRSSKLVSWKSTGRLQQTLANCIERRGKALHSGKGSTVRLCPGFAGEGRYFDYRSNLIPASIDFVQVSPLCTTLCKNGFRVRTVEHLLSALEAAGVDNCRIEIENLDAEERDAEQIPIFDGSAREWVEAVDEVGLKVATTRDGKHCEKMAAHVNEPVYVWRDDSFVSAFPSNVVKISYGISFLQAPAIGSQWFSTPSVDNLFYTRQIALARTFCIYEEIEQMRNVGLIKGGSLENAIVCCTSKGWLNPPLRFNDEPCRHKVLDLIGDLSLFAQFGNQGLPVAHIVAYKGGHALHAGLARQLMGE 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03558 310 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 2 308 IPR004463 GO:0008759|GO:0009245
Arst6g03558 310 Gene3D lpxc deacetylase, domain 2 157 310 IPR011334 GO:0008759|GO:0009245
Arst6g03558 310 Coils Coil 102 122 - -
Arst6g03558 310 Gene3D lpxc deacetylase, domain 1 20 148 IPR015870 GO:0008759|GO:0009245
Arst6g03558 310 SUPERFAMILY Ribosomal protein S5 domain 2-like 21 142 IPR020568 -
Arst6g03558 310 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 22 308 IPR004463 GO:0008759|GO:0009245
Arst6g03558 310 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 22 308 IPR004463 GO:0008759|GO:0009245
Arst6g03558 310 SUPERFAMILY Ribosomal protein S5 domain 2-like 161 308 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03558 Arst-Chr6 103508185 103512105 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03558 4 307 Carbohydrate Esterase AT1G25054 61.513 4.75e-139 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03558 K02535 - gmx:100814465 500.745