Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03540 ATGGCTGGTTCTGCGAACCTCAATGGTGATAGTAGAATTGAGAATCTGATTTCTGCTAGGAAGTCATTGAAGCTTAGCTTAGAGAAATCAAAGTCTTTAGGGTTAGCATTGGAGAAAGCAGGGCCTAGATTGGAGGAGATTGGGCAAAGATTGCCCTCGCTTGAAGCTGCGGTTCGCCCAATTCGCGCCGATAAGGATGCTCTGGTGGCCGTCGGCGGCCACATTAATCGCGCCGTTGGTCCTGCGGCCGCGGTGCTTAAGGTATTTGATGCCGTTCATGGCCTTGAAAAGTCGCTCTTGTCGGATCCGAGAAATGATCTGGCTGGATACATGGCGGTGTTGAAGCGCCTTGAGGAGGCACTGAGGTTCTTGGGAGAGAATTGTGGGTTGGCAATTCAATGGCTGGAGGATATAGTGGAGTATTTGGAGGATAACACGGTTGCGGACGAGAGGTATCTCGCGAATTTGAAGAAGGCGTTGAAGAATCTTAGGGAGTTGCAGAATGATGAGGAGAAGGCGCGGCTTGATGGTGGGCTTTTGGAAGCTGCATTGGATAAATTGGAGAATGAGTTCCGCCAGCTCTTGACTGAGAATAGTGTGCCGCTTCCAATGGCGGCTGCTCTTGGTGATCAAGCGTGCATCGCACCATCGCCTTTGCCTGTATCTGTTATTCACAAGTTGCAAGCTATTCTTGGTAGACTGAAAGCTAATAATAGACTTGAGAAGTGCATATCGATTTATGTTGAAGTCCGTAGTTCTAATGTGAGAGCCAGTTTGCAGGCTCTCAATTTGGATTACCTTGAAATTTCGGTGTCTGAATTCAATGATGTGCAGAGCATAGAGGGGTATATAGGGCAATGGGGAAAACATTTAGAATTTGCAGTGAAACATTTGTTTGAGGCTGAGTATAAGCTTTGTAATGACGTATTCGAGAGGATGGGGCTCGATGTTTGGATGGGTTGTTTTTCGAGGATAGCTGCGCAAGCTGGTATACTAGCATTTCTTCAATTTGGGAAGACCGTCACGGAGAGTAAGAAAGACCCCATTAAACTTTTGAAGTTGTTGGATATTTTCGCGTCTTTGAACAAATTGAGGCTTGATTTCAACCGTCTATTTGGAGGAGCAGCATGTGCTGAAATCCAGAATTTGACTAGGGATCTTATTAAGAGTGTCATCGATGGTGCAGCAGAGATTTTCTGGGAACTTCTGCTACAGGTGGAGTTGCAGAGGCAGAGTCCACCCCCTCTAGACGGCAATGTTCCGAGATTGGTGAGTTTTATCACCGATTACTGTAACAAATTACTTGGTGATGACTATAAGCCAATATTGACACAGGTCTTGATCATTCACCGAAGTTGGAAGCGTCAGAGCTTTCAGGAGAAACTTCTTGTTACTGAAATTTTGAACATTGTGAAAGCTGTTGAACTGAATTTGGAAACATGGATCAAGGCTTATGAAGATCCTATGTTGATGAACTTCTTCGCTATGAACAATCACTGGCACCTTTACAAACATTTGAAAGGGACAAAGCTTGGGGATCTCTTGGGAGATTCTTGGTTAAGGGAACATGAAAATTACAAAGAATATTACTCGACAATCTTCTTGCGAGAGAGCTGGGGAAAGCTTCCTTCACACTTGAGTAGAGAAGGGCTGATTCTCTTCTCCGGAGGGCGGGCTACTGCTCGGGATCTGGTCAAGAAAAGGTTAAAAAAGTTCAATGAAGTTTTCGATGAGATGTATGGGAAGCAGTCGGGTTGGGTCATGCCGGAGCGAGATCTGAGGGAGAAGACATGTCAGCTTATAGTGCAAGCTGTGGTCCCTGTTTACCGGAGTTACATGCAGAATTACGGCCCCTTGGTCGAGCAAGAAGCTAGCTCCACAAAATATGCAAAATACACAGTGCAGAAGCTGGAGGAGATGCTTTCATGTCTTTATCGGCCAAAGCCTGTGAGGCATGCCAGTTTGAGGGGTCGGCAGTTCAGCGGAAAATATGGCAATGGAATGCCAGATCTTCGTCGTACAGCTTCTGCAGTTGTGTAG 2040 0.4593 MAGSANLNGDSRIENLISARKSLKLSLEKSKSLGLALEKAGPRLEEIGQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLAGYMAVLKRLEEALRFLGENCGLAIQWLEDIVEYLEDNTVADERYLANLKKALKNLRELQNDEEKARLDGGLLEAALDKLENEFRQLLTENSVPLPMAAALGDQACIAPSPLPVSVIHKLQAILGRLKANNRLEKCISIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIGQWGKHLEFAVKHLFEAEYKLCNDVFERMGLDVWMGCFSRIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAACAEIQNLTRDLIKSVIDGAAEIFWELLLQVELQRQSPPPLDGNVPRLVSFITDYCNKLLGDDYKPILTQVLIIHRSWKRQSFQEKLLVTEILNIVKAVELNLETWIKAYEDPMLMNFFAMNNHWHLYKHLKGTKLGDLLGDSWLREHENYKEYYSTIFLRESWGKLPSHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYGKQSGWVMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQEASSTKYAKYTVQKLEEMLSCLYRPKPVRHASLRGRQFSGKYGNGMPDLRRTASAVV 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03540 679 FunFam Exocyst subunit Exo70 family protein 135 651 - -
Arst6g03540 679 Pfam Exo70 exocyst complex subunit 286 642 IPR046364 GO:0000145|GO:0005546|GO:0006887
Arst6g03540 679 Coils Coil 149 176 - -
Arst6g03540 679 Gene3D Exocyst complex component Exo70 135 653 - -
Arst6g03540 679 PANTHER EXOCYST COMPLEX PROTEIN EXO70 118 641 IPR004140 GO:0000145|GO:0006887
Arst6g03540 679 SUPERFAMILY Cullin repeat-like 85 645 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03540 Arst-Chr6 103296211 103299587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03540 10 679 EXO70 exocyst subunit family AT4G31540 76.324 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03540 K07195 - gmx:100796139 1143.64