Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03520 ATGGGTCATAAAAGAAAACACTATTGCTTTCTCATGATCTTCACCATGTTGGCCTTTAATTTTGTGGCAACATTGGGTGACACATATGAACAAATTTTGATCACGTTCAAAAGCTCCTTGTCCAATTCGGACATTGCTTTGAGTAATTGGGGCACGGAGCCAAATCTTTGTAAATGGAATGGTTTATTGTGTGACAAGAAAACACAATCATTTCATGGGTTGAGACTAGAGAATATGGGACTAAGTGGGAGAATTGATGTTGACACATTATTTGAGTTATCAAATTTGACAAGCTTCAGTGTCATAGGAAATAACTTTGAGGGTCCAATGCCTGAATTCAAGAAGATTGTGTGGTTAAGAGCTTTGTTTCTTTCTAATAACAAATTCTCTGGTGACATTGCTGATGATGCTTTTGAGGGTATGAAAAGATTGAAGAAGGTGTACTTGGAAGAGAATGAGTTGAGTGGTTATATTCCAAAGTCCATTGCTGAATTGCCTAAGCTTTTGGAATTGAACTTAAGTGGTAACAGTTTTGAAGGACAAATACCAGAGTTTCATCAAAAGAATCTCAGCTTTAATGTGTTTGATTTATCAAACAACCTATTGGAGGGTATCATACCCCAAAGCTTAAGCAACCAAGATCCAATCCGATTTGCTGGCAACATAAATCTATGTGGAAAGCCTATGAACAAGAGCTGCAACGCCGATCCTAACGTGACCTTTGACTCCCCTTCTCCTTCTCCAAATGCAAAGAACCGCCGCAATCTTATAATTGCTATCACGGTGGTGGCCGCGGTTGTGGTTGCTTCAATGCTAGTACTTCTTTTCATCTCCGGCCGCCGCGGATGGCCCACGAAATCAAGCAAGAGGCTAAAATCAACACCCCATAAGAATCACTCAGCCTACTATAGTGCACAATCATCAATTGATGTTAAGGGAGAGTTGAATTTTGTAGGGGAAGATAGAGGGAAAGCATTTGATTTGCAAGGGTTGCTTAGGGCTTCAGCTGAGGTACTTGGTAGTGGAAGTTTTGGTTGTACCTACAAAGCTATGGTTGTGAATAATAATAGTGGTAATGAAGAAGCAGTGGTTGTGAAAAGGTTTAGGCACATGAACAATGTTGGGAAACATGAGTTCTATGATCATATGAGAAGGCTTGGGAGTTTGTCACACCCTAATTTGCTCCCTCTTGTTGCATTCCACTATACAAGACAAGACAAGTTTTTGGTTTATGATTTTGGTCATAATCATAGCTTGGCTACTCATCTCCACGGTAGGAAAAATGGATGCATGCTAACTTGGCCAACTCGTTTAAAGATCATAAAAGGAGTGGCAAGGGGACTTGCATATCTCTACACACAATTTCCAAACCAAAAAGTCCCCCATGGCCATCTCAAATCCTCCAACGTCATCTTGGACGCGGCGTTCCAGCCGCGTCTAACGGAGTACGGCCTTGTCCCGGTGATGAACAAGAGCCATGCTCAGAAATTCATGGCAGCATATAAGTCTCCTGAGTCATCCGAGCGGACAACCGAGAAGACGGACGTGTGGTGTCTTGGCATCTTGATTCTAGAAGTGCTGACGGGGAAGTTCCCGGCGAACTATTTAAGGCATGGAGGGAAGGCTGAGAATAATGCTGACCTGGCAACTTGGGTGAACACGGTGGTGAGGGAAGAGTGGAGTGGAGAAGTGTTTGATGAGGGCATAATGGGAATTAAAAATGGTGAGGGTGAGATGTTGAAGCTTTTGAGGATTGGGATGTGTTGTTGTGAGTGGGATTTGGAGAGTAGGTGGGATTTGAAGGAGGCTTTGGCAAAGATTGAAGAGGTCAAGGACATTGGGGAAGATAATAATAATAATATTAATAATTCAAATTCTTATTCTTATGTTAGTGAAGGAGATTTGCATTCTAGGGCTACTACTTTCACTCAAGACGATTTCTCTTTCTCAATTATTGCTGCTACTTGA 1968 0.4187 MGHKRKHYCFLMIFTMLAFNFVATLGDTYEQILITFKSSLSNSDIALSNWGTEPNLCKWNGLLCDKKTQSFHGLRLENMGLSGRIDVDTLFELSNLTSFSVIGNNFEGPMPEFKKIVWLRALFLSNNKFSGDIADDAFEGMKRLKKVYLEENELSGYIPKSIAELPKLLELNLSGNSFEGQIPEFHQKNLSFNVFDLSNNLLEGIIPQSLSNQDPIRFAGNINLCGKPMNKSCNADPNVTFDSPSPSPNAKNRRNLIIAITVVAAVVVASMLVLLFISGRRGWPTKSSKRLKSTPHKNHSAYYSAQSSIDVKGELNFVGEDRGKAFDLQGLLRASAEVLGSGSFGCTYKAMVVNNNSGNEEAVVVKRFRHMNNVGKHEFYDHMRRLGSLSHPNLLPLVAFHYTRQDKFLVYDFGHNHSLATHLHGRKNGCMLTWPTRLKIIKGVARGLAYLYTQFPNQKVPHGHLKSSNVILDAAFQPRLTEYGLVPVMNKSHAQKFMAAYKSPESSERTTEKTDVWCLGILILEVLTGKFPANYLRHGGKAENNADLATWVNTVVREEWSGEVFDEGIMGIKNGEGEMLKLLRIGMCCCEWDLESRWDLKEALAKIEEVKDIGEDNNNNINNSNSYSYVSEGDLHSRATTFTQDDFSFSIIAAT 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03520 655 ProSiteProfiles Protein kinase domain profile. 333 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03520 655 Gene3D Ribonuclease Inhibitor 25 116 IPR032675 -
Arst6g03520 655 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 614 IPR046959 -
Arst6g03520 655 Pfam Protein kinase domain 337 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03520 655 SUPERFAMILY Protein kinase-like (PK-like) 337 608 IPR011009 -
Arst6g03520 655 Gene3D Transferase(Phosphotransferase) domain 1 415 634 - -
Arst6g03520 655 ProSitePatterns Protein kinases ATP-binding region signature. 339 366 IPR017441 GO:0005524
Arst6g03520 655 Pfam Leucine rich repeat N-terminal domain 31 65 IPR013210 -
Arst6g03520 655 SUPERFAMILY L domain-like 33 213 - -
Arst6g03520 655 Pfam Leucine rich repeat 119 177 IPR001611 GO:0005515
Arst6g03520 655 Gene3D Phosphorylase Kinase; domain 1 327 413 - -
Arst6g03520 655 Gene3D Ribonuclease Inhibitor 119 235 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03520 Arst-Chr6 103019910 103022956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03520 9 634 Receptor kinase-like Gene Family AT5G35390 43.445 2.67e-171 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Arst6g03520 Pkinase 2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03520 - - ahf:112754157 920.998