Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03486 ATGTGGCACACCCAAGTTACTAGTGGACATGTTAATAAGGTCGACGAAATCACCGACGTCATGAGAAATGATGAGTTGGATTTAAGACACGAGTTGCCGGATTATAGTGGACTCAGTGAAGAGGAAATTCCAGTCATAGGAATGAGATTTGATTCGCTGCATTTGGCACAGGAGTTTTATGCAAGTTATGCAAAGAAATTGGGATTTGTAACTAAAGTCAGGAACACGAACTTCGACAAGATGCGGAAGGATGCAAAGATACCCATTAATCAATCTCTTCACTGCACTCGAGAGGGTTATCGAGAATCTCGTGTTAAGGCAGCAACTAGGTCAAACAGAATAACAGCCACGAAATGCAAAGCAAGAATGTATGTCATGCTAGACAGGGAGAAGGAATGTTGGGTTGTGTCCAGGGTAGAATTGAGGCATTCTCACTCCTGTTCGGCTGAGAAAGCTGTCTACTATCATGAGTACCGGGAGCTGACTATGCATGCCAAGTGCGTCATTACGGATAACGACGAGGCTGGCATAAGACCCAACAAGACGTATCTAGCACTGGCAAACGAAGTTGGTGGGTCTTCAAACCTGAGTTTCTCAGAAAAGAATGTCAGAAATTACATTACAAGCAATCTCCGATGCTCCGATGACAATGCGGACTTCAATGGGATGATGAATTATTTTGTTCGAATGAAGGAAATCAATCCCAACTTCTTTTATGTCATAGATATTGACGATGCTAATAAATTTAGGAGCGCACTCTGGGTAGATGCAAGGTGCAGGACTTCGTATGAATATTACGGAGATGTGGTATCGTTTGACACCACGTACAGGAGAAACAGGCATGGTCTACTGTTTGCATCCTTTGTCGGTGTAAACCACCATGGGAAGTCTACTCTTCTTGGCTGTGCTTTACTTGGCAATGAGGAGATCCCTAGTTTCGAGTGGGTGTTCACGCAGTGGGTGAGATGCATTGGGACTGGGCCAAAGGGGATCATCACTGACCAGTGCAAGGCGATGACTGGTGCTATAAGGAAGGTCCTACCTGATACTATCCACAGATGGTGCATTTGGCACATAATGAAGAAAACACAATTCAAGCTTGGTGACGCTAGGTACGGAGAGTTGAGTGCAATGATGAATCACATTGTGTATAACTCTCCTTCGAGTGAATCGTTTGAAGTTGATTGGGCTGCTTTCATCAAAGAATTTGCGTTAGGCCAGAATAGATGGTTAGCAGATCTTTATGCGAATCGACGTAAGTGCGTGCCAATATTCTTCAAGAGTGAATTTTGGGCCGGCATGAGGAGTACACAGTGGAGTGAAAGTATGCACGCATTCTACGGTGGATACCTGCATTGCAAGAGTGGGTTGGTTCAGTTCGTCCATGAATACGATAATGTGCTTGGAAATAAGGAGCAAAAGGAGCTTGAAGATGATGCTGCGGACTCGAAAGGAGTCATCCCATGTATAGGGAGCACAGGCATTGAGCGACAGTTTCAACAGGAATACACCAGTAATATGTTCCGGACCCTTCAGCTGGAGGTAAGGAAAAAAACTGAGTGTGTGGTTCGATCAACTAAACAAAAGGGAGATACAATTTCTATTAAAGTGGACGAGCAAAAGGTATTTTGGGGGAAGCCTGTCTACCATACTTTCATAGTACAGTTTGACCCTTTGAGTCGAAAGAGTCGGTGCGAGTGCAACAAATTTAAATCCGTTGGTATATTGTGTTGCCACATCCTTGCGGCCTGGTCATACTATAGAGTTGACACAGTACCGAGCTGCTATGTTCTTCCTCGATGGAGTAAGAATGTCATCCGCAAGCACACTTACATTAAGAGTAGCCATGACGTGGCTCGGAGTAATGAAAGCCACAATTTGTTCAGGCATCTGTGTTCAGAGTTCTATAACGTTGCTCAGGAATTTGTTGCTTGTGAAGAGGAAGCAGCCATCTTGCGAGCTACTCTTTCGGATGCAAAGTCCAAGCTGACTGATCACCGTGCCAGCATGCGTTCCACTACTCTTGATGGGACTCAGAATACGATGCCCACACAGAGCACATGCGATGTTATTTTACATGACATACAGGGACCCTCAAGGGTGAAAACCAAAGGACGGCCGAAGGTTAAGAGACTTGGAGCAGAGTTGGACAAGTCAATTAAGAAGTCAATGGAAAAAAGAAAGAGGAAATCACAACCGGATGTTGTTGACCTTCAGACAAATAATGATTGTCAAGGTTTTGTAGACAACAGATTTGAGGATTCTACTATATGGAATTCATCAGATGGTGGCGGATTCATGGACCTGTTGAACTCTTTTAGGCATTTATAG 2331 0.4423 MWHTQVTSGHVNKVDEITDVMRNDELDLRHELPDYSGLSEEEIPVIGMRFDSLHLAQEFYASYAKKLGFVTKVRNTNFDKMRKDAKIPINQSLHCTREGYRESRVKAATRSNRITATKCKARMYVMLDREKECWVVSRVELRHSHSCSAEKAVYYHEYRELTMHAKCVITDNDEAGIRPNKTYLALANEVGGSSNLSFSEKNVRNYITSNLRCSDDNADFNGMMNYFVRMKEINPNFFYVIDIDDANKFRSALWVDARCRTSYEYYGDVVSFDTTYRRNRHGLLFASFVGVNHHGKSTLLGCALLGNEEIPSFEWVFTQWVRCIGTGPKGIITDQCKAMTGAIRKVLPDTIHRWCIWHIMKKTQFKLGDARYGELSAMMNHIVYNSPSSESFEVDWAAFIKEFALGQNRWLADLYANRRKCVPIFFKSEFWAGMRSTQWSESMHAFYGGYLHCKSGLVQFVHEYDNVLGNKEQKELEDDAADSKGVIPCIGSTGIERQFQQEYTSNMFRTLQLEVRKKTECVVRSTKQKGDTISIKVDEQKVFWGKPVYHTFIVQFDPLSRKSRCECNKFKSVGILCCHILAAWSYYRVDTVPSCYVLPRWSKNVIRKHTYIKSSHDVARSNESHNLFRHLCSEFYNVAQEFVACEEEAAILRATLSDAKSKLTDHRASMRSTTLDGTQNTMPTQSTCDVILHDIQGPSRVKTKGRPKVKRLGAELDKSIKKSMEKRKRKSQPDVVDLQTNNDCQGFVDNRFEDSTIWNSSDGGGFMDLLNSFRHL 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03486 776 ProSiteProfiles Zinc finger SWIM-type profile. 552 588 IPR007527 GO:0008270
Arst6g03486 776 SMART 26again6 563 590 IPR006564 GO:0008270
Arst6g03486 776 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 650 IPR031052 GO:0006355
Arst6g03486 776 Pfam FAR1 DNA-binding domain 58 147 IPR004330 -
Arst6g03486 776 Pfam MULE transposase domain 269 362 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03486 Arst-Chr6 102653647 102657054 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst6g03486 MULE 1.4e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03486 - - ahf:112730161 1320.84