Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03485 ATGAATGGTGACGGGAAAATCCCTGTTGCTCCATCGGAGGAACACATTGATGGTGCTCAGAAGAATAGAGCATTGCATGGGAGGACTACTGGTCCAACAAGGCGTTCTACAAAAGGGAATTGGACACCTGAACAGGATGAGATCTTGCGGAAGGCTGTTCAGCATTTCAAAGGAAAGAATTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTACAATGCCTACATAGGTGGCAGAAAGTCTTAAATCCTGATCTTGTCAAGGGCCCATGGTCTAAGGAGGAAGATGAAGTAATTATTGAATTGGTGAATAAATATGGACCTAAAAAATGGTCTACTATTGCTCATCATTTACCAGGACGCATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTGGTATAAACAAGGAAGCATGGACACAGGAAGAGGAGTTGACCTTAATCCGTGCTCATCAAATTTATGGAAACAAATGGGCTGAATTAACGAAGTTCTTGCCTGGGAGGACAGATAATTCTATTAAGAACCATTGGCACAGTTCTGTCAAAAAGAAATTGGATTCTTACTTGGCATCAGGGTTGCTTGCTCAGTTTCAATCTGCACCACTTGCTGGAAATCCTGATCAACAGATGGTTTTAACTTCAGAGATGCACTCCGTTGGAGATGGTAATGGTCCTAAGAGGACTGATAGAGAGGATGTTTCAGAGTGTAGCCAAGAATCAGCTGATTCTGCTGGATTGACTAGTAATCTTGATCTACAAACTCGAGAGGTGTATAAGCCAGAGGAAGAATCTATTCTAGGAAAGGATCATAATCTGAGTCAAGCATCCTGTCCACAGCATTACTACATATCTCTTGATGATGTGGATATCTGCATCCCAGAAGTTGCTTGCCAAGATGCTTGCTCTTCTCAATTTGCTGAGCAGATATGCTCACACAAATCTGGAAATGCCCTAACTGGGGATTACCAGTTTAATTGTGTGGATAATAGTGAAATGTGTAACATGGTAAATGTTCCCTTTCAGACTGAGGGGTTAGGTATTTCAACTTTGATGAGACCTGCATCTATGGATCCTGCTAAGCCAAATAACATGTCAATATCTGAGGATGAATGTTGCAGATTCCTATTTTCGGAGGCAGTTAGTGATGGATGCTTTTCTCCCAGAGTTTATATTAAAGACGTGGACATGGTTGATTTTTCTGGATGCAATATGTTTTTATGTCAATCATGTCATATCCAGATACCTTCTCCTCGTGAATCATCTTCGACTTCACAGCTTACTTGTCCAAAGTGTTCTAACAACTTTAAAGATCATCAAATTGTCTCTGGTGGACCTGATAATGTCATTTCTTCTAATGGCACATCCAGTTCTCCTTGTGTTGACAATATAGATAGTGAAGTAAAGCAAGAGCCACCAGAAACTCCAAAGGATTCTTCAAAATTGGTCCCTGTAAATAGTTTTGGTTATGGATCAAACTCTAAGGTAACTTGTTATGCAAAATATGAGAAGTTGAATGAGCATTCAAAAAAGGAAGATACAGGAACTTTATGCTACCAACCGCCCTGTTTTCCAAGCTTGGATATTCCTTTCCTAAGCTGTGATCTTGCACAATCTGAGCCTGATATGCAGCAAGAATTTAGTCCCCTTGGTATCCGCCAGCTTCTGATGTCTCCTGTGAGCTGTCTAACTCCTTTCAGGTTGTGGGACTCACCCTCTGGTGGTGATAATCTAGATGCCTTGTTTAAAAGTGCAGCCAAAACTTTTACTGGTACACCATCCATATTAAGTAAACGACACCGAGATTTGTTATCACCACTTTCAGATAAAAGAACTGACAAGAAACTTGTGACAGACATGCCATCCAGCTTGATAAAAAGCTTTTCCAGCTTGGACTTTATGTTTGATGACAATGAGAATCGGGAGGCAGATATGATTTCTCCAACTTCATTACAAAAATGGAGCATTGCTGTGTCTGTTGATGATGATAAAGAAAATTGTGGTCAAACTGTTAAAGATAAACAAGTAGAAGAGAAAAATAATTCTGCCAATTTGGACGAAAATAACAGAGAAAATGGGACTGTAAAAAATAGCTCTCAGGATAGCCTTAAGCATCAAGTTGATTCAAAGATGAAGAAGATTGATATTGACACTGATAATGATGATGATAACGATAATGATAATGTTGAACAGCCTTCTGGAATTTTGATTGAACGTAATATGAATGACATAGCACCAAATTCTCCTGGATTAGACACAGTTCTAGGTTCAAGTGCTCGAACTCCCAAGAACTTGAGCAATAGGAGGTTGGAAGCAGTTCCGAATCAGCGCAGTCCATGCTCAAGGGTCAAGTGTGTCCGGGCAAAGGAGCATGAAAAACTTTCAGTTGATGTCACTTGTGTAGGGACGACTTCAGGGAAACAAGCCAAAAATGATGGTGGTTTTGAAACAAGTAGCATATTTGGTGACACTCCTTTTATGAAAAGCATTAAATCACCTTCTGCATGGAAATCTCCATGGTTCATCAACGCAACATTTCTGTGCAGCCCCAGGATTGCTACTGAAATTGCAATTGAGGATTATGGGTACTTAATGAGCTCAGGCAATAGAAGCTATGACGCCATCGGTTTGATGAAACAGATCAGTGAAAAAACTGCTGCTACATATGCTAATGCTCAAGAAGTTTTGGAAAATAAAACTCCTAAAGCTTTGCCTAAAAATGCATCTTTAAATGACAAAGAAGGTGGTCAGGAAGATAATGATCTGCAGAAACAGCCTGCTAAGCATTCTCAGATGGAACGACGCATACTTGACTTTAGTGAATGTGAAACAACACCAAGCAAAGGTGATAACAGCAAATCCTCACCTGTGAACTTCTCAAGCCCTTCTTCATATTTGTTGAAGGGTTGTAGATAA 2931 0.4002 MNGDGKIPVAPSEEHIDGAQKNRALHGRTTGPTRRSTKGNWTPEQDEILRKAVQHFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPDLVKGPWSKEEDEVIIELVNKYGPKKWSTIAHHLPGRIGKQCRERWHNHLNPGINKEAWTQEEELTLIRAHQIYGNKWAELTKFLPGRTDNSIKNHWHSSVKKKLDSYLASGLLAQFQSAPLAGNPDQQMVLTSEMHSVGDGNGPKRTDREDVSECSQESADSAGLTSNLDLQTREVYKPEEESILGKDHNLSQASCPQHYYISLDDVDICIPEVACQDACSSQFAEQICSHKSGNALTGDYQFNCVDNSEMCNMVNVPFQTEGLGISTLMRPASMDPAKPNNMSISEDECCRFLFSEAVSDGCFSPRVYIKDVDMVDFSGCNMFLCQSCHIQIPSPRESSSTSQLTCPKCSNNFKDHQIVSGGPDNVISSNGTSSSPCVDNIDSEVKQEPPETPKDSSKLVPVNSFGYGSNSKVTCYAKYEKLNEHSKKEDTGTLCYQPPCFPSLDIPFLSCDLAQSEPDMQQEFSPLGIRQLLMSPVSCLTPFRLWDSPSGGDNLDALFKSAAKTFTGTPSILSKRHRDLLSPLSDKRTDKKLVTDMPSSLIKSFSSLDFMFDDNENREADMISPTSLQKWSIAVSVDDDKENCGQTVKDKQVEEKNNSANLDENNRENGTVKNSSQDSLKHQVDSKMKKIDIDTDNDDDNDNDNVEQPSGILIERNMNDIAPNSPGLDTVLGSSARTPKNLSNRRLEAVPNQRSPCSRVKCVRAKEHEKLSVDVTCVGTTSGKQAKNDGGFETSSIFGDTPFMKSIKSPSAWKSPWFINATFLCSPRIATEIAIEDYGYLMSSGNRSYDAIGLMKQISEKTAATYANAQEVLENKTPKALPKNASLNDKEGGQEDNDLQKQPAKHSQMERRILDFSECETTPSKGDNSKSSPVNFSSPSSYLLKGCR 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03485 976 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 140 IPR017930 -
Arst6g03485 976 ProSiteProfiles Myb-like domain profile. 85 136 IPR001005 -
Arst6g03485 976 Gene3D - 37 89 - -
Arst6g03485 976 SUPERFAMILY Homeodomain-like 87 183 IPR009057 -
Arst6g03485 976 SMART sant 37 86 IPR001005 -
Arst6g03485 976 SMART sant 89 138 IPR001005 -
Arst6g03485 976 SMART sant 141 189 IPR001005 -
Arst6g03485 976 Gene3D - 143 202 - -
Arst6g03485 976 ProSiteProfiles Myb-like domain profile. 33 84 IPR001005 -
Arst6g03485 976 MobiDBLite consensus disorder prediction 448 488 - -
Arst6g03485 976 CDD SANT 40 84 IPR001005 -
Arst6g03485 976 MobiDBLite consensus disorder prediction 691 707 - -
Arst6g03485 976 PANTHER MYB PROTEIN-RELATED 38 123 - -
Arst6g03485 976 MobiDBLite consensus disorder prediction 903 976 - -
Arst6g03485 976 FunFam Transcriptional activator Myb isoform A 90 142 - -
Arst6g03485 976 CDD SANT 144 184 IPR001005 -
Arst6g03485 976 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 84 IPR017930 -
Arst6g03485 976 FunFam Transcription factor MYB3R-2 143 205 - -
Arst6g03485 976 MobiDBLite consensus disorder prediction 228 243 - -
Arst6g03485 976 Gene3D - 90 141 - -
Arst6g03485 976 SUPERFAMILY Homeodomain-like 36 98 IPR009057 -
Arst6g03485 976 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 141 191 IPR017930 -
Arst6g03485 976 MobiDBLite consensus disorder prediction 222 258 - -
Arst6g03485 976 CDD SANT 92 136 IPR001005 -
Arst6g03485 976 MobiDBLite consensus disorder prediction 448 469 - -
Arst6g03485 976 MobiDBLite consensus disorder prediction 949 970 - -
Arst6g03485 976 MobiDBLite consensus disorder prediction 1 41 - -
Arst6g03485 976 MobiDBLite consensus disorder prediction 678 736 - -
Arst6g03485 976 FunFam Transcriptional activator Myb isoform A 37 89 - -
Arst6g03485 976 Pfam Myb-like DNA-binding domain 90 136 IPR001005 -
Arst6g03485 976 Pfam Myb-like DNA-binding domain 142 184 IPR001005 -
Arst6g03485 976 Pfam Myb-like DNA-binding domain 38 84 IPR001005 -
Arst6g03485 976 MobiDBLite consensus disorder prediction 244 258 - -
Arst6g03485 976 MobiDBLite consensus disorder prediction 917 946 - -
Arst6g03485 976 ProSiteProfiles Myb-like domain profile. 137 187 IPR001005 -
Arst6g03485 976 MobiDBLite consensus disorder prediction 708 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03485 Arst-Chr6 102645849 102651350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03485 1 976 MYB Transcription Factor Family AT4G32730 42.297 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst6g03485 Myb_DNA-binding 7.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03485 - K09420 ahf:112755435 1909.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03485 6 102645849 102651350 Arst6g03485 6 102645849 102651350 ECH
Arst6g03485 6 102645849 102651350 Arst10g02621 10 90868145 90874207 PCT