Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03461 ATGGAAACACCAAGTTTTTTTCAGAACAACTTCTGCTCTCAATTCACCTCTGATGGCGAGAACCACAATAACAATAACAACACTGCTGTAAGTACAGGAGACAATTTCATCGTGGAAGATCTCCTTGACTTTTCAAACGATGACGGTATCATTGCCAACAATAACGGTGTTGTTGCCACCTTGGACTCTGTCCCAGGAAACTCCGTTTCAGCCGATTCTTCTAATACTACAGTGGTTGAAAGCTGCAATTCCTCCTCCTTCTCTTTTTCTGGTTGCGACCCTGGTATGGTTGCGGATATTGGTAGTCGGAGTCTTGTGGATGGTCATTTCTCTGGTGAACTTTGTGTTCCGTATGACGATTTGGCAGAGTTGGAATGGCTTTCCAATTTTGTGGAGGAATCCTTCTCCAGTGAGGATCTACAAAAGATGCAACTCATCTCAGGGATGAAGAGACCAAACGATGATGCTACATCGGAGGCCCGCAAGTTCCGCCCAGAACCCAACAGGAAAAGCCCAATATTCAACTCAGAAGTGTCAGTGCCAGCCAAGGCCCGTAGCAAGCGGTCTCGTGTGCCTCCATGCAATTGGACTTCACGCCTCCTTGTACTCTCTCCAACTCCAACTCCCACAACGTCATCATCATCAGAACCTGACGTCATGGTCCCTATTTCTACTCCAACTCCAGTGTCCTTCACTATTCCGGTCACCGGAAAAAAGCCTGCGAAGACGACAGGAAGAAAAAAGGAAGGTGGGGACTACGGTTCTGGTGATGGTCGCAAGTGCTTGCATTGTGCTACGGACAAGACACCGCAGTGGCGGACTGGGCCCATGGGCCCTAAAACGTTGTGCAATGCTTGTGGTGTGAGGTACAAGTCAGGCCGGCTTGTGCCGGAGTACAGGCCCGCGGCAAGCCCCACGTTTGTGTTAACTAAGCACTCTAACTCACATCGAAAGGTTTTGGAGTTGCGAAGACAAAAGGAGATGATGAGAGCACAACAACACCATCATCAACACCAACAACAGTTCATACAACATCATCATCATCACCAGAACATGATGTTTGATGTACCCACGAACGCTGATGATTACTTAATCCACCAACATGTTGGGCCCGATTTCAGGCAGTTGATTTAG 1134 0.4806 METPSFFQNNFCSQFTSDGENHNNNNNTAVSTGDNFIVEDLLDFSNDDGIIANNNGVVATLDSVPGNSVSADSSNTTVVESCNSSSFSFSGCDPGMVADIGSRSLVDGHFSGELCVPYDDLAELEWLSNFVEESFSSEDLQKMQLISGMKRPNDDATSEARKFRPEPNRKSPIFNSEVSVPAKARSKRSRVPPCNWTSRLLVLSPTPTPTTSSSSEPDVMVPISTPTPVSFTIPVTGKKPAKTTGRKKEGGDYGSGDGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEMMRAQQHHHQHQQQFIQHHHHHQNMMFDVPTNADDYLIHQHVGPDFRQLI 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03461 377 MobiDBLite consensus disorder prediction 154 168 - -
Arst6g03461 377 SMART GATA_3 255 305 IPR000679 GO:0006355|GO:0043565
Arst6g03461 377 ProSiteProfiles GATA-type zinc finger domain profile. 255 291 IPR000679 GO:0006355|GO:0043565
Arst6g03461 377 Gene3D - 254 305 IPR013088 GO:0006355|GO:0008270
Arst6g03461 377 Pfam GATA zinc finger 261 294 IPR000679 GO:0006355|GO:0043565
Arst6g03461 377 ProSitePatterns GATA-type zinc finger domain. 261 286 IPR000679 GO:0006355|GO:0043565
Arst6g03461 377 CDD ZnF_GATA 260 307 IPR000679 GO:0006355|GO:0043565
Arst6g03461 377 MobiDBLite consensus disorder prediction 231 254 - -
Arst6g03461 377 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 257 319 - -
Arst6g03461 377 FunFam GATA transcription factor 252 338 - -
Arst6g03461 377 PANTHER GATA TRANSCRIPTION FACTOR 23 335 - -
Arst6g03461 377 MobiDBLite consensus disorder prediction 149 191 - -
Arst6g03461 377 PIRSF Txn_fac_GATA_plant 19 351 IPR016679 GO:0003677|GO:0005634|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03461 Arst-Chr6 102375716 102378342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03461 35 377 C2C2-Gata Transcription Factor Family AT5G25830 52.235 1.05e-97 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Arst6g03461 GATA 3.5e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03461 - - zju:107420464 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03461 6 102375716 102378342 Arst6g03461 6 102375716 102378342 ECH