Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03460 ATGAATGCTTCCATTTCGGAGCTTGAAAGCACCTCAAACTCGTTATCATTTTCTTTCTCAGCATCACCGCCGCCGCCGCCGCCACCACTAAAACAATCGTCTTCAACGAAATTAAAGGGCAAAACGTACTCAAACAACAAGCACCCGGTGTACCGAGGGGTACGGATGCGGAACTGGGGGAAATGGGTGTCGGAAATCCGGGAGCCGCGCAAGAAATCGCGCATATGGCTGGGCACATTTCCGACACCGGAGATGGCGGCCAGGGCTCACGACGTGGCCGCACTAAGCATCAAAGGAAATTCCGCCATTCTGAATTTTCCTGACCTTGAAAACTGCCTTCCTCGCCCGGCATCCTTGGCGCCTCGCGACGTCCAGGCTGCCGCGGCGAAGGCAGCTCACATGGACAAGTTTGAGTTATTAATACCTTCTTCGTCCCCGTCCTCGTCCTCGCTGACTTTCGAGCTGACGGAGATTATTGAGCTTCCGAGGCTCGAAACCGGGGACGAGTACCGGAAGGAGTTTGTGTTTGTGGACTCCGAGGATGCATGGATGTATCAGCCACCTCCAATGCCGTGGTTGCTGTACGGACAAGAAGAAGAAGAAGAAGGTACTTCTTTCCGGAGTTTTCTTTCGGATTACTAA 642 0.5327 MNASISELESTSNSLSFSFSASPPPPPPPLKQSSSTKLKGKTYSNNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPDLENCLPRPASLAPRDVQAAAAKAAHMDKFELLIPSSSPSSSSLTFELTEIIELPRLETGDEYRKEFVFVDSEDAWMYQPPPMPWLLYGQEEEEEGTSFRSFLSDY 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03460 213 Gene3D AP2/ERF domain 50 108 IPR036955 GO:0003700|GO:0006355
Arst6g03460 213 MobiDBLite consensus disorder prediction 15 47 - -
Arst6g03460 213 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
Arst6g03460 213 CDD AP2 51 109 IPR001471 GO:0003700|GO:0006355
Arst6g03460 213 Pfam AP2 domain 49 99 IPR001471 GO:0003700|GO:0006355
Arst6g03460 213 SUPERFAMILY DNA-binding domain 50 108 IPR016177 GO:0003677
Arst6g03460 213 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Arst6g03460 213 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Arst6g03460 213 FunFam Ethylene-responsive transcription factor 2 49 108 - -
Arst6g03460 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 34 168 - -
Arst6g03460 213 SMART rav1_2 50 113 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03460 Arst-Chr6 102361916 102362707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03460 31 201 AP2-EREBP Transcription Factor Family AT5G11590 54.082 3.10e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst6g03460 AP2 2.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03460 K09286 - gmx:100305349 224.172