Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03455 ATGGCTGCCGGAAACGCAGTCATCGGAGGGAAGTACAAAATTGGTCAGAAAATTGCAAGTGGCTCATTTGGTGAAATTCATATAGGGTCACATATTGAGAATGCTGAAACTGTTGCAATTAAGATGGAGAATAGGAAAACCAAACAACCACAGCTACTTTATGAAGCTCAGCTATATAATCTTCTAAAAGGAGGAAGTGGTATTCCAAGAGTGAAATGGAGTGGCACTGATAGAGACAACAACTTTCTAGTTCTTGATCTTTTAGGACCAAGTCTTGAAGACCTTTTTTACTATTGTGGGAAGAAATTTTCATTAAAAACCGTTTTGATGTTGGCTGATCAAATGCTTACAAGGATAGAGTATTTGCATTCCAAGGGCTTTTTGCATAGAGACATTAAGCCAGATAACTTCCTTATGGGTCTTGGCAGAAAAGCAAAACAGGTTTATATGATTGATTTTGGACTTGCAAAGAGATACAGAGACCCTATCACAAATAAGCATATCCCTTGTAGGGAAAACAAACTTTTAATAGGGACTCCACGTTATGCTAGTCGCAATACTCATTCGGGATTTGAACAAAGTCGCCGGGATGATCTGGAGTCTCTTGGTTATGTTCTTATGTACTTTATAAGAGGAAGCCTTCCTTGGCAAGGTCTACAAGCTCCAACAAATAAACAAAAATACGACAAAATTTGTGAAATGAAGAAATCAATTCCAATTGATATACTTTGCAAGTCATGTCCTGTGCAGTTCGCATCATACTTTCGGTATTGCCATTCTTTGACATTTGATCAACGACCAGATTATGGATTCTTGAAGCGCATGTTTCGTGATTTATTCAATGCTCAAGGATATGATGATTTATTTGACTGGACCATTCTAAAATATCAGCAAATGCGGCAGACAAAGACGTTAATTGAATCAAACGATGGTGACAACCAACAAGGTATGTAA 954 0.3774 MAAGNAVIGGKYKIGQKIASGSFGEIHIGSHIENAETVAIKMENRKTKQPQLLYEAQLYNLLKGGSGIPRVKWSGTDRDNNFLVLDLLGPSLEDLFYYCGKKFSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGRKAKQVYMIDFGLAKRYRDPITNKHIPCRENKLLIGTPRYASRNTHSGFEQSRRDDLESLGYVLMYFIRGSLPWQGLQAPTNKQKYDKICEMKKSIPIDILCKSCPVQFASYFRYCHSLTFDQRPDYGFLKRMFRDLFNAQGYDDLFDWTILKYQQMRQTKTLIESNDGDNQQGM 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03455 317 Pfam Protein kinase domain 12 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03455 317 ProSiteProfiles Protein kinase domain profile. 12 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03455 317 Gene3D Transferase(Phosphotransferase) domain 1 3 316 - -
Arst6g03455 317 SMART serkin_6 12 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03455 317 PANTHER CASEIN KINASE-RELATED 10 296 - -
Arst6g03455 317 SUPERFAMILY Protein kinase-like (PK-like) 8 285 IPR011009 -
Arst6g03455 317 FunFam CK1 family protein kinase 4 316 - -
Arst6g03455 317 CDD STKc_CK1 11 276 - -
Arst6g03455 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03455 Arst-Chr6 102301682 102307758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03455 10 252 CBL-interacting serine-threonine protein kinases AT4G24400 27.490 3.24e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Arst6g03455 Pkinase 7.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03455 K08960 - gmx:100782913 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02509 10 87891300 87896511 Arst6g03455 6 102301682 102307758 PCT