Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03423 ATGGGGAAAAAAGGAGGCTGGTTTTCGTCAGTAAAGAAAGTTTTCAAGTCCTCGTCGTCGTCATCCTCTTCTTCTAATAAGAATTTGTTGCCGGCTCCGGCGCCTGCCAAAAAGAAGGACAACAACCCAGGGAAGAAACAGCAGCACCAAGTACCAGCAGCAGCAGAAGTTGTGCCTTTTGAGCGGTTTCAAGCAGAGACTTCACCAAATGTGATCATTGAGGAGACTGCCACGTCATCAGCGTCTGGGGCTGAAGACAGGAATCATGCTATTGCGGTTGCGGCAGCAACTGCAGCGGCTGCGGAGGCAGCGGTTGCGGCTGCTCAGGCTGCNNNNNNNNNNNNNNNNAGACTGGCGGGTTATGGGCGGCATTATTCCAAGGAAGAGAGAGCGGCAACAGTGATTCAGTCATACTACAGGGGCTACCTGGCTCGACGCGCTTTGCGTGCATTAAAGGGACTTGTGAGGTTGCAAGCGCTGGTGAGGGGACACAATGTGCGGAAGCAAGCTCAGATGACAATGCGGTGTATGCAAGCATTAGTGAGGGTGCAAGCACGAGTGAGAGCTCGCAGGATTCAGCTCAATCATGAGAAGCATCTTCATCATCATGAAGAAGATGATGATATTGATGATGAGCAACAAGTACAAGTTCATCCGAAGCAAGTTGCCAATAATAATAAGCCTATCATGATGAGCCCCATGAGAAATAGTGATGGTTGGGACAATAGGCATCAAAGTAGCCACAAGGTTAGGGAAAATGATTTGAGGAAACATGATACTGCAATGAAGAGGGAGAGAGCTCTTGCTTATGCTTTCAACTCCCAGCAGCAACCACATAATCAATACATGCAAACAGCTCCAAATAGTGATGATATGGGAACTTATTATCCCAATGAGCGGGAAAAAGCCCAATGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCTCAACCGCACAATGTTAATCACCTGAGCCCACGTGAGACCCCTTATATGAATCTTGCTTCCACAACCTCAACCACAACAGATAACATGTCTGAGAAAACCGTAGAAATGGACAAGATTGCAACTCCTGGCCCAAGTAATAATCTCAACATGGGCCCAATGAACCAAGACTTTGTTGACCAAAGCCCAATTCTAAGTAGACAACATCAAAGACCTCCAAGCCCAAGTAGACCCAGCTATATGGCACCAACTCAGTCTGCAAAGGCCAAGGTTCGGGATCAAGGCCCAAGCAAGCCACGGGCCTCACCTGGGCCACAATGGAACTCATCGACAAAGGGAGGTTCTGTTACTGGTTCAGGCTGTGACTCGTCTAGCTCCGGTGGAACAACAAGTTACCAATATATCAGGAGCCCAAGCCCAAAGATTAATGGGTTTCGTCCTCAATCTAGAAGGATAGTTAGCAGCAACCCAGATTACATTGAAGACTGGGCCATTCAACTTGGAACTCATGGTTGGGCATAG 1467 0.4778 MGKKGGWFSSVKKVFKSSSSSSSSSNKNLLPAPAPAKKKDNNPGKKQQHQVPAAAEVVPFERFQAETSPNVIIEETATSSASGAEDRNHAIAVAAATAAAAEAAVAAAQAAXXXXXRLAGYGRHYSKEERAATVIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRIQLNHEKHLHHHEEDDDIDDEQQVQVHPKQVANNNKPIMMSPMRNSDGWDNRHQSSHKVRENDLRKHDTAMKRERALAYAFNSQQQPHNQYMQTAPNSDDMGTYYPNEREKAQWGWNWLERWMSSQPHNVNHLSPRETPYMNLASTTSTTTDNMSEKTVEMDKIATPGPSNNLNMGPMNQDFVDQSPILSRQHQRPPSPSRPSYMAPTQSAKAKVRDQGPSKPRASPGPQWNSSTKGGSVTGSGCDSSSSGGTTSYQYIRSPSPKINGFRPQSRRIVSSNPDYIEDWAIQLGTHGWA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03423 488 SMART iq_5 150 171 IPR000048 GO:0005515
Arst6g03423 488 SMART iq_5 127 149 IPR000048 GO:0005515
Arst6g03423 488 MobiDBLite consensus disorder prediction 226 245 - -
Arst6g03423 488 Gene3D - 128 170 - -
Arst6g03423 488 Pfam IQ calmodulin-binding motif 129 149 IPR000048 GO:0005515
Arst6g03423 488 Pfam IQ calmodulin-binding motif 155 170 IPR000048 GO:0005515
Arst6g03423 488 MobiDBLite consensus disorder prediction 416 464 - -
Arst6g03423 488 MobiDBLite consensus disorder prediction 354 464 - -
Arst6g03423 488 PANTHER IQ-DOMAIN 5-RELATED 1 432 - -
Arst6g03423 488 MobiDBLite consensus disorder prediction 17 57 - -
Arst6g03423 488 ProSiteProfiles IQ motif profile. 152 179 IPR000048 GO:0005515
Arst6g03423 488 ProSiteProfiles IQ motif profile. 128 156 IPR000048 GO:0005515
Arst6g03423 488 MobiDBLite consensus disorder prediction 356 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03423 Arst-Chr6 101862917 101867994 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03423 1 456 IQD Protein Family AT3G49260 45.511 4.87e-89 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03423 - - adu:107495204 811.986