Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03421 ATGCAAGCCACAATATTATGTAATGTGATCCATATCAGCAATATTCCTCTCATCACCACCAGGTACTACTCAGATCATTCAATTCCGATGGGGAAAAAAGGAGGCTGGTTTTCGTCAGTAAAGAAAGTTTTCAAGTCCTCGTCGTCGTCATCCTCTTCTTCTAATAAGAATTTGTTGCCGGCTCCGGCGCCTGCCAAAAAGAAGGACAACAACCCAGGGAAGAAACAGCAGCACCAAGTACCAGCAGCAGCAGAAGTTGTGCCTTTTGAGCGGTTTCAAGCAGAGACTTCACCAAATGTGATCATTGAGGAGACTGCCACGTCATCAGCGTCTGGGGCTGAAGACAGGAATCATGCTATTGCGGTTGCGGCAGCAACTGCAGCGGCTGCGGAGGCAGCGGTTGCGGCTGCTCAGGCTGCNNNNNNNNNNNNNNNNAGACTGGCGGGTTATGGGCGGCATTATTCCAAGGAAGAGAGAGCGGCAACAGTGATTCAGTCATACTACAGGGGCTACCTGGCTCGACGCGCTTTGCGTGCATTAAAGGGACTTGTGAGGTTGCAAGCGCTGGTGAGGGGACACAATGTGCGGAAGCAAGCTCAGATGACAATGCGGTGTATGCAAGCATTAGTGAGGGTGCAAGCACGAGTGAGAGCTCGCAGGATTCAGCTCAATCATGAGAAGCATCTTCATCATCATGAAGAAGATGATGATATTGATGATGAGCAACAAGTACAAGTTCATCCGAAGCAAGTTGCCAATAATAATAAGCCTATCATGATGAGCCCCATGAGAAATAGTGATGGTTGGGACAATAGGCATCAAAGTAGCCACAAGGTTAGGGAAAATGATTTGAGGAAACATGATACTGCAATGAAGAGGGAGAGAGCTCTTGCTTATGCTTTCAACTCCCAGCAGCAACCACATAATCAATACATGCAAACAGCTCCAAATAGTGATGATATGGGAACTTATTATCCCAATGAGCGGGAAAAAGCCCAATGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCTCAACCGCACAATGTTAATCACCTGAGCCCACGTGAGACCCCTTATATGAATCTTGCTTCCACAACCTCAACCACAACAGATAACATGTCTGAGAAAACCGTAGAAATGGACAAGATTGCAACTCCTGGCCCAAGTAATAATCTCAACATGGGCCCAATGAACCAAGACTTTGTTGACCAAAGCCCAATTCTAAGTAGACAACATCAAAGACCTCCAAGCCCAAGTAGACCCAGCTATATGGCACCAACTCAGTCTGCAAAGGCCAAGGTTCGGGATCAAGGCCCAAGCAAGCCACGGGCCTCACCTGGGCCACAATGGAACTCATCGACAAAGGGAGGTTCTGTTACTGGTTCAGGCTGTGACTCGTCTAGCTCCGGTGGAACAACAAGTTACCAATATATCAGGAGCCCAAGCCCAAAGATTAATGGGTTTCGTCCTCAATCTAGAAGGATAGTTAGCAGCAACCCAGATTACATTGAAGACTGGGCCATTCAACTTGGAACTCATGGTTGGGCATAG 1554 0.473 MQATILCNVIHISNIPLITTRYYSDHSIPMGKKGGWFSSVKKVFKSSSSSSSSSNKNLLPAPAPAKKKDNNPGKKQQHQVPAAAEVVPFERFQAETSPNVIIEETATSSASGAEDRNHAIAVAAATAAAAEAAVAAAQAAXXXXXRLAGYGRHYSKEERAATVIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRIQLNHEKHLHHHEEDDDIDDEQQVQVHPKQVANNNKPIMMSPMRNSDGWDNRHQSSHKVRENDLRKHDTAMKRERALAYAFNSQQQPHNQYMQTAPNSDDMGTYYPNEREKAQWGWNWLERWMSSQPHNVNHLSPRETPYMNLASTTSTTTDNMSEKTVEMDKIATPGPSNNLNMGPMNQDFVDQSPILSRQHQRPPSPSRPSYMAPTQSAKAKVRDQGPSKPRASPGPQWNSSTKGGSVTGSGCDSSSSGGTTSYQYIRSPSPKINGFRPQSRRIVSSNPDYIEDWAIQLGTHGWA 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03421 517 ProSiteProfiles IQ motif profile. 181 208 IPR000048 GO:0005515
Arst6g03421 517 MobiDBLite consensus disorder prediction 51 82 - -
Arst6g03421 517 MobiDBLite consensus disorder prediction 445 493 - -
Arst6g03421 517 MobiDBLite consensus disorder prediction 383 493 - -
Arst6g03421 517 Gene3D - 157 199 - -
Arst6g03421 517 PANTHER IQ-DOMAIN 5-RELATED 30 461 - -
Arst6g03421 517 MobiDBLite consensus disorder prediction 385 427 - -
Arst6g03421 517 Pfam IQ calmodulin-binding motif 158 178 IPR000048 GO:0005515
Arst6g03421 517 Pfam IQ calmodulin-binding motif 184 199 IPR000048 GO:0005515
Arst6g03421 517 ProSiteProfiles IQ motif profile. 157 185 IPR000048 GO:0005515
Arst6g03421 517 SMART iq_5 156 178 IPR000048 GO:0005515
Arst6g03421 517 SMART iq_5 179 200 IPR000048 GO:0005515
Arst6g03421 517 MobiDBLite consensus disorder prediction 255 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03421 Arst-Chr6 101862917 101868000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03421 30 485 IQD Protein Family AT3G49260 45.511 1.43e-88 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03421 - - adu:107495204 870.922