Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03380 ATGGAGTGCAATAAAGATGAGGCAGTTAGGGCCAAAGAAGTGGCAGAGAGGAAATTATCTGAAAAGGACTACGTTGGTGCAAAAAGGTTTGCTCTCAAGGCTCTTAATTTGTATCCTGCACTGGAGGGTCTTACCCAGTTTGTGACAACCTTGGATGTTTATATCTCCGCCGAGAAAAAAATAAGTGGAGTAACAGATTGGTATGGTGTACTTGGAGTGACTCCTTCTGCTGATGATGAGACAGTTAAAAAGCAGTACAGAAAGCTGATTCTCGCTCTTCATCCTGACAAAAACAAGTCTCCAGGTGCAGACGGTGCGTTTAAGCTTGTTTCTGAGGCATGGACTTTGCTATCAGATAAGGCGAGAAGACTAGCATATAATCAGAAGAGGAGTTCAACAGGGTTTCAGCATAATGCTCCCAACCACGTTGTGTCGCAACCAAAAGCACCCAATCCAAATAGGATGGCAACTCCAAATGCAAGAACTGGAAGTAATAATGCTCAGGCTCCTCCAACATCCGTTCCTCCTCCATATAGAATGGTTGATACCTTTTGGACTATCTGTAGTCGTTGTAGTACACTACTTCAATATCTCAGGATTTATTTGAATGTTGCGCTACGATGTCCAAACTGTAATCAGGCGTTTGTGGCTGTAGAGAAGGTTCCACCTGCTGATGGTGTTAAGTCTTTTAATTGGTCCGCTCAGCAACATCAACAAAATTCTCAGCCTCGTGCTGGTGGTTGGGATCACCCCACTACTAATCCAGGAAGAACTCATTCAGTTTCTCAAAACATAGAATCAAGCAGTATGCGAGGCGGGTCTTCTTTTAGTAACACAAACTCCCAGTACGCTCCTCACTCAAGAATGCATGGTTTTGCTAGCAAAGATAGTTCAGCATCTACTCCAGCTGCATCTACTAAGCAGCAGGCAACTGTGAAATCAAGAAGCAAATGTGAGGGTGCTCCTTCAATTTCTGCAAGGGAGAGCAGTCACAAGTACAAGAGATCTGATGGTTCTTTCAATAATGTCCAAAGAACTGTAAAGAAAATGAGATCAGATGACATTCACATGGGTATAGAAACGACACATGGTTTTTCACGTTTTACTAACAAGCATCGCAGCATGAAAGAGTTGTCAACGTATGAATTGCGAAACATGTTGATCAATAAAGCACAGAATGAGATTCGCGAGAAACTCCAAGAATGGAAATCAACAGCTGAAGATAAGGTTACAAACAAGGACAAAGGAACCGAGACACAAAAAGGCACGTTAAAGGACAAAACTTGTTCAGAGAAGCAGGAAGATAAGGTTATGAACAAGGACGAAGGAAATGTGAGACAAAAAGGCTTGTTAAATGACAAAACAACTGGTTCGGAGAAGCATGAAGATTCCACCATTAATGATAATGGACATCTGGAAAGTGATCCTGTTCCCGTCACATCTGATGATACTGGAAAGGAGAACCAAGACTGCTATGTGATTCCCGTTGCTGATTCTGATTTTCACAATTTTGACTTGGAAAGAGCTGAAAATTCCTTTGCAGAGGACCAGGTCTGGGCAGCTTACGATGATGATGATAAAATGCCTAGATTTTATGTTAAAGTTCAAAAGGTGATGTCAACGAAGCCATTTAAAATGAGTGTCAGTTGGCTTAACTCTCGAAGCAACAAAGAATTGGGGCCGATGGATTGGATAGGTTCTGGTTTTTATAAAACTTGTGGGGATTTCACGATCGGCAAACGTGAAATAACTGGATCGTTAAATTCCTTTTCCCACAAGGTTAGATGGACAAAAGGCAACAGAGGAATCGTTCGAATCTTTCCGAGGAAGGGGGATATCTGGGCCCTTTATAGAAACTGGTCTCCTGATTGGAATAAAGATACTCCCGATGAAGTGAAGCACAAGTATGATATGGTGGAAGTACTTGATGATTTCAATGACAAGCAAGGTGTACTAGTTACACCACTTATCAAGGTTGATGGTTTTGTGGCAGTGTTTCAGAGGATTGAAGGTCATGATCTGGTAAGGAAGATTCCCAAAGTGGAGATGTTTCGATTCTCTCATCAGGTTCCTAATTACTTGCTTACAGGACAAGAAGCTCCTAATGCTCCAAAGGGTTGTCAAGAGTTGGATCCAGCAGCCACCTCTTTAGACCTCCTTCAGACAAAGAATGAAGCCAATGTTGAAAAATCAAAGGAAGAGACAAGTTAG 2211 0.4202 MECNKDEAVRAKEVAERKLSEKDYVGAKRFALKALNLYPALEGLTQFVTTLDVYISAEKKISGVTDWYGVLGVTPSADDETVKKQYRKLILALHPDKNKSPGADGAFKLVSEAWTLLSDKARRLAYNQKRSSTGFQHNAPNHVVSQPKAPNPNRMATPNARTGSNNAQAPPTSVPPPYRMVDTFWTICSRCSTLLQYLRIYLNVALRCPNCNQAFVAVEKVPPADGVKSFNWSAQQHQQNSQPRAGGWDHPTTNPGRTHSVSQNIESSSMRGGSSFSNTNSQYAPHSRMHGFASKDSSASTPAASTKQQATVKSRSKCEGAPSISARESSHKYKRSDGSFNNVQRTVKKMRSDDIHMGIETTHGFSRFTNKHRSMKELSTYELRNMLINKAQNEIREKLQEWKSTAEDKVTNKDKGTETQKGTLKDKTCSEKQEDKVMNKDEGNVRQKGLLNDKTTGSEKHEDSTINDNGHLESDPVPVTSDDTGKENQDCYVIPVADSDFHNFDLERAENSFAEDQVWAAYDDDDKMPRFYVKVQKVMSTKPFKMSVSWLNSRSNKELGPMDWIGSGFYKTCGDFTIGKREITGSLNSFSHKVRWTKGNRGIVRIFPRKGDIWALYRNWSPDWNKDTPDEVKHKYDMVEVLDDFNDKQGVLVTPLIKVDGFVAVFQRIEGHDLVRKIPKVEMFRFSHQVPNYLLTGQEAPNAPKGCQELDPAATSLDLLQTKNEANVEKSKEETS 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03380 736 Gene3D DnaJ domain 55 148 IPR036869 -
Arst6g03380 736 SMART dnaj_3 65 122 IPR001623 -
Arst6g03380 736 PANTHER BNAC03G44070D PROTEIN 1 715 - -
Arst6g03380 736 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Arst6g03380 736 Pfam DnaJ domain 66 127 IPR001623 -
Arst6g03380 736 MobiDBLite consensus disorder prediction 407 485 - -
Arst6g03380 736 Pfam Domain of unknown function (DUF3444) 495 699 IPR024593 -
Arst6g03380 736 SUPERFAMILY Chaperone J-domain 65 126 IPR036869 -
Arst6g03380 736 MobiDBLite consensus disorder prediction 233 318 - -
Arst6g03380 736 MobiDBLite consensus disorder prediction 233 338 - -
Arst6g03380 736 MobiDBLite consensus disorder prediction 131 174 - -
Arst6g03380 736 MobiDBLite consensus disorder prediction 131 169 - -
Arst6g03380 736 PRINTS DnaJ domain signature 102 122 IPR001623 -
Arst6g03380 736 PRINTS DnaJ domain signature 68 86 IPR001623 -
Arst6g03380 736 PRINTS DnaJ domain signature 86 101 IPR001623 -
Arst6g03380 736 MobiDBLite consensus disorder prediction 407 469 - -
Arst6g03380 736 CDD DnaJ 66 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03380 Arst-Chr6 101250358 101252857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03380 4 223 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.579 3.51e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03380 - - aip:107647573 1441.79