Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03379 ATGGTATGCAGCAGTTGTGTAAGGTCTTTGGTTGTTCAAGCTGGAACCTTTGCCAAACGAGTGAGAATAAACAACACTAGGAGGAGTTTGCAAGCTGTCCCTAGTATTTCTTATTCGCCTACTCGTCAATTTAAGACATTCACAGTGATGATGGTGGATACGGGTTCCGTGTCAAGAAGTGCTGGTTCCCTTGTGGATATGATGCCAGAGAAAGATGATGATGGCCGGTTTGCAAGTGGAGGGTGGAAAAGTGAGGATGGAAGGCTTAGCTGTGGGTATTCAAGCTTCAGAGGGAAGAGAGTAACGATGGAGGATTTTTATGATATTAAAACATTGAAGACTGGTGGTCATTCAGTATGCTTATTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGCAGAGTATTTGAAAGAGCATCTCTTTGATAATCTCATGAAGCATCCAAAATTTTTTACTGATGCCAAATTGGCTATAAGTGAAACGTATCAAGGGACTGATTCTCAATTTCTGGATTCTGAAAAAGACACTTTCCGGGATGATGGCTCTACTGCTTCAACCGCTGTTTTGATTGATAACCATCTCTATGTTGCTAATGTTGGAGATTCTAGGACTATAATATCGAAGGCTGGTAAAGCAATTGCTCTCTCCGAGGATCATAAGCCAAACAGAAGTGATGAACGGAAGAGAATTGAGAATGCTGGGGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTAGGAGGTGTCCTAGCAATGTCTCGCGCCTTTGGCAATCGTATGTTGAAGCAGTTTGTTGTTGCAGAACCTGAGATCCAGGACCAGGAGATAGATGAACAAACTGAATTGCTGATTCTTGCAAGTGATGGACTTTGGGATGTAGTACCAAATGATGATGCCATTGCTCTTGCTTGCACAGAAGAGGAGCCTGAGGCAGCTGCTCGTAAGTTAACAGAAGCAGCATTTTCTCGTGGCAGTGCAGATAACATTACATGCATTGTGGTGCGCTTTCATCATGACAGAACAGAACCCATTGGTACTGACAAAGTAGATGCTATTGTTCCTGACAAAGTAGATACCGCTGTTCCTGACAAAGCAGAAGTGGCATCAGCTAGTGTCAAGCAAGAGAGGAACAAAGCAGATGCCACCGTTCCTGACAGAACAGAAGCGGCATCAGCTAGTGTCAAGCAAGGGGGGGAATCTACTTGA 1206 0.442 MVCSSCVRSLVVQAGTFAKRVRINNTRRSLQAVPSISYSPTRQFKTFTVMMVDTGSVSRSAGSLVDMMPEKDDDGRFASGGWKSEDGRLSCGYSSFRGKRVTMEDFYDIKTLKTGGHSVCLFGIFDGHGGSRAAEYLKEHLFDNLMKHPKFFTDAKLAISETYQGTDSQFLDSEKDTFRDDGSTASTAVLIDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDQEIDEQTELLILASDGLWDVVPNDDAIALACTEEEPEAAARKLTEAAFSRGSADNITCIVVRFHHDRTEPIGTDKVDAIVPDKVDTAVPDKAEVASASVKQERNKADATVPDRTEAASASVKQGGEST 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03379 401 SMART PP2C_SIG_2 88 336 IPR001932 -
Arst6g03379 401 ProSiteProfiles PPM-type phosphatase domain profile. 90 336 IPR001932 -
Arst6g03379 401 MobiDBLite consensus disorder prediction 369 383 - -
Arst6g03379 401 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
Arst6g03379 401 SUPERFAMILY PP2C-like 86 337 IPR036457 -
Arst6g03379 401 CDD PP2Cc 90 336 IPR001932 -
Arst6g03379 401 PANTHER PROTEIN PHOSPHATASE 72 336 IPR015655 GO:0004722|GO:0006470
Arst6g03379 401 MobiDBLite consensus disorder prediction 364 401 - -
Arst6g03379 401 Gene3D - 81 380 IPR036457 -
Arst6g03379 401 Pfam Protein phosphatase 2C 92 329 IPR001932 -
Arst6g03379 401 SMART PP2C_4 80 334 IPR001932 -
Arst6g03379 401 FunFam Probable protein phosphatase 2C 76 82 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03379 Arst-Chr6 101236668 101243293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03379 1 342 PP2C-type Phosphatase Gene Family AT5G53140 70.904 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03379 K17506 - gmx:100805795 602.823