Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03374 ATGAGAACTCAGCCAGACAAGTTTGTTAGGTTTCAGGACTGGAATTCAGACAAGGGTTCTGAGAGCAATTATCCTGTGATCAACATTGCACCTTCGCAGAGATTCAAAACTACATTAAATTCTATATCTGCAAAGTTTCAAAGGGGATTGGAATATGGTTTTCAAAGGATAAAGAGATTCAGTTTATCATTCAAGTCCTTTCTGTTCAGCCGTGCTTTTTCTAGTAACTTTAGTTCTAGAAAGAAAATCCTTGATCCACAGGGTCCGTTCCTTCAAAAATGGAACAAGATATTTGTATTGCTATGTGTTATTGCAGTATCACTGGATCCTTTGTTCTTTTATGTCCCTGTGATCGATGATGAGAAGAAATGTCTTTCACTGGACAACAAGATGGAGATTACAGCAACTGTTTTAAGAACTTTCTCCGATATCTTTTATATAGTCCACATGATTTTCCAGTTTCGTACTGGATTCATTGCTCCATCTTCTCGAGTGTTTGGAAGAGGTGTTTTGGTTGAGGATTCTTGGGCAATAGCAAAGCGATATCTAACATCTTATTTCTTAGTTGACATTCTTTCTGTTCTTCCCCTTCCACAGGTTGTTGGTGCCTTTTGGTACTTGTTTTCTATAGAACGGGAAACCACATGCTGGCAAAAAGCCTGCACCCGAAGTAATGCAACATGTAATAAGGAGGACATGTATTGCAACAATCATCAAGGAGGGTTAAGCACAATTTCAACGTTTCTCAATGCTTCTTGCCCAATAAAGGAGACAAACACGACACTTTTTGATTTTGGGATATTCCTTGATGCCCTTCAATCTGGTGTTGTGGAGTCAAGAGACTTTCCACAAAAGTTCTTTTATTGTTTTTGGTGGGGCCTAAAAAGTTTGAGTTCTCTTGGTCAAAACCTGACGACAAGTACCTTTGTGTGGGAAATCTGCTTTGCAGTTTTCATTTCCATCGCTGGGTTGGTATTATTTTCATTCCTTATCGGGAATATGCAGACATATTTGCAATCAACAACAACAAGATTAGAGGAGATGAGGGTGAAAAGGAGAGATGCAGAACAGTGGATGTCTCATAGACTCCTCCCTGACAGCCTTAGGCAGCGAATCAGACGATATGAGCAGTACAAATGGCAAGAAACCAGAGGTGTTGATGAGGATAACTTGATTTGCAATCTTCCAAAGGATTTGAGAAGGGACATTAAGCGCCATCTTTGCTTGGCTTTGCTGATGAGAGTGCCAATGTTTGAGAAAATGGATGAACAACTTTTGGATGCCATGTGTGATCGTCTTAAGCCAGTGCTTTACACGGAAGAAAGCTATATTGTCCGGGAAGGAGACCCTGTCGATGAGATGCTTTTCATAATGCGAGGCAGGTTATTGACAATGACAACCAACGGAGGAAGAACAGGCTTCTTTAATTCCGAGTATCTTAAAGCCGGTGACTTTTGCGGAGAAGAGCTTCTCACATGGGCTTTAGATCCTCATTCTTCATCCAACCTCCCCATCTCAACCAGGACTGTCCAAACACTTTCAGAAGTGGAAGCTTTCGCTCTAAAAGCCGATGACTTGAAGTTTGTGGCTTCTCAATTTAGGCGTCTTCACAGCAAGCAGCTACGCCACACTTTCCGGTTCTACTCGCAACAGTGGCGCACATGGGCCGCATGTTTCATTCAAGCGGCCTGGCGTCGCTATGCTAAAAAGAAGCTTGAAGAGTCTCTCGTTGAAGAAGAGAATAGGCTGAAAGATGCATTGGCAAAGGTAGGTGGTAGCTCACCAAGTCTAGGTGCCACCATATATGCCTCCAGGTTTGCTGCCAATGCACTTAGATTGTTGCGGCGTAACCGCACAAGGAAGACAAGGATGCCGGAGAGAATACCCCCCATGCTGCTTCAGAAGCCTGCGGAACCTGATTTTACTGATGAAGAGCAGTAA 1941 0.4266 MRTQPDKFVRFQDWNSDKGSESNYPVINIAPSQRFKTTLNSISAKFQRGLEYGFQRIKRFSLSFKSFLFSRAFSSNFSSRKKILDPQGPFLQKWNKIFVLLCVIAVSLDPLFFYVPVIDDEKKCLSLDNKMEITATVLRTFSDIFYIVHMIFQFRTGFIAPSSRVFGRGVLVEDSWAIAKRYLTSYFLVDILSVLPLPQVVGAFWYLFSIERETTCWQKACTRSNATCNKEDMYCNNHQGGLSTISTFLNASCPIKETNTTLFDFGIFLDALQSGVVESRDFPQKFFYCFWWGLKSLSSLGQNLTTSTFVWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRQRIRRYEQYKWQETRGVDEDNLICNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDAMCDRLKPVLYTEESYIVREGDPVDEMLFIMRGRLLTMTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPHSSSNLPISTRTVQTLSEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYAKKKLEESLVEEENRLKDALAKVGGSSPSLGATIYASRFAANALRLLRRNRTRKTRMPERIPPMLLQKPAEPDFTDEEQ 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03374 646 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 200 641 - -
Arst6g03374 646 Gene3D Jelly Rolls 415 535 IPR014710 -
Arst6g03374 646 SMART cnmp_10 417 548 IPR000595 -
Arst6g03374 646 Pfam Cyclic nucleotide-binding domain 437 528 IPR000595 -
Arst6g03374 646 FunFam Cyclic nucleotide-gated ion channel 1 344 408 - -
Arst6g03374 646 Coils Coil 569 589 - -
Arst6g03374 646 SUPERFAMILY cAMP-binding domain-like 346 539 IPR018490 -
Arst6g03374 646 Gene3D Helix hairpin bin 343 408 - -
Arst6g03374 646 ProSiteProfiles cAMP/cGMP binding motif profile. 417 501 IPR000595 -
Arst6g03374 646 SUPERFAMILY Voltage-gated potassium channels 85 339 - -
Arst6g03374 646 Pfam Ion transport protein 200 344 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst6g03374 646 FunFam Cyclic nucleotide-gated ion channel 1 415 533 - -
Arst6g03374 646 CDD CAP_ED 417 548 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03374 Arst-Chr6 101193751 101200077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03374 169 645 Ion Channels AT5G53130 80.793 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03374 K05391 - gmx:100801032 806.979