Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03352 ATGTTCCGTTCTCAAAATTTCTCCATTTTGCTGTTGGTTCTTTTTCTGGCGCCAAATTCCGTTACAGTTAACTGCCGATGTACGGACAAATGTGGACGCATCAAGATCCAGTTCCCATTTCATCTCAAAAATAGGAACCTGAATGAAAACGCTACCTATCTACCTGGATTTGAACTCTCATGTAACGATAAACATCAAGCTCTGCTGAAACTTCCAAAGGTTCCATCAGTAAGCTTCTTTGTGAAGCAAATCGATTACAAATCTCAGCAAATTCAGATCTATCACCCAAATAACTGCCTTGCCAGCCAGCTTTTAGCACTCGGAAATTCGTCAACTTCACCTTTCCGATTCATATCACCATATTACGGCGGCGAAACTAGTTACAATAATGTCTCTTTCTTTCGTTGCGCTTCGAGTTCTTCCTATTCCTGTCCAATTTTGCAACTAGATTCTATTAGCGACATCATTGATCCAGGAATACTATCTTGCACCAAGGTGCGTGATGTTTTATCGGTCCAGTGGAGGTTTACGTATGATGATAAGACTAGTTTGTTTCTTGGATGGTCGAACCCTAACTGTGGGCAGTGTGAAGCACAGGGCAAGAAATGCAGACTCAAGAGCGATGGTACTAAAGAGGAAATTGAGTGTTTCCTTTGCAAAACAAACAAGATTTCGACATCCACTCTTGTTCTAATTGTTGCAGGGACAATAATTTGTTTGATGCTTTTGGTCTTGTTGGCCTTTGCAATGTACCATATTTATCGGTACTTTAAGACTAAAGGAGAAGACCAAGACAGGATAGAAAAATTCTTGGAGGATTACAGGGCCATGAAGCCTACAAGATTCACTTACAAAGATATTAAGAGAATCACAAATGGCTTTAAGGAAAGCTTAGGCGAAGGAGCACACGGAGCAGTATTCAAAGGAATGCTCTCCAAAGAAATTCTTGTTGCCGTGAAGGTACTCAATGATACACAAGGTGATGGCAAGGATTTCATAAATGAAGTGGGAACTATGGGAAAGATTCATCATGTCAATGTTGTTCGCTTGCTCGGATTCTGCGCAGACGGATTCCACCGTGCTCTTGTCTATGATCTGTTTCCGAACGGTTCGTTGCAGAAATTCTTAGCTCCACCGGATAACAGGGATGCTTTCCTTGGTTGGGTGAAGCTTCAGAGAATTGCTCTTGGTGTTGCCAAAGGCCTTGAGTATCTCCATCTTGGTTGTGATCATAGGATACTCCATTTTGACATAAATCCCCATAATGTGTTACTAGATGATCACTTCACTCCAAAAATAACAGATTTTGGCCTTGCAAAGTTGTGTCCGAAAAATCAAAGCACGGTGTCTATGACCGCGGCGAGGGGGACATTGGGCTATATTGCCCCTGAAGTATTCTCAAGAAATTTTGGTAACGTGTCGTACAAGTCTGATATTTATAGCTTCGGAATGCTGCTACTTGAGATGGTTGGAGGAAGAAAGAACACAAATGTGTCTGGTGAGGAAATTTTCCAAGTTTTGTACCCAGAATGGATCCATAATATGCTTGAAGGGAAAGACATCCACATTGATATTGACAATGAGGGAGACATGAAGATTGCCAAGAAACTTGCCATTGTAGGACTTTGGTGCATTCAGTGGAATCCTGTAGATCGTCCATCAATGAAAACTGTGGTACAAATGCTTGAAAGGGAAGGAGACAAGTTAATGGTCCCCCCTACACCGTTTGACTCCACTACCAGCTCAAGTAGAAACAATAATAATGCAGTTGTTCCATCAAGACATCTAAATTTTGAGCTAGAGGTTATTCCTGAGTTAGAGTAA 1824 0.4145 MFRSQNFSILLLVLFLAPNSVTVNCRCTDKCGRIKIQFPFHLKNRNLNENATYLPGFELSCNDKHQALLKLPKVPSVSFFVKQIDYKSQQIQIYHPNNCLASQLLALGNSSTSPFRFISPYYGGETSYNNVSFFRCASSSSYSCPILQLDSISDIIDPGILSCTKVRDVLSVQWRFTYDDKTSLFLGWSNPNCGQCEAQGKKCRLKSDGTKEEIECFLCKTNKISTSTLVLIVAGTIICLMLLVLLAFAMYHIYRYFKTKGEDQDRIEKFLEDYRAMKPTRFTYKDIKRITNGFKESLGEGAHGAVFKGMLSKEILVAVKVLNDTQGDGKDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDLFPNGSLQKFLAPPDNRDAFLGWVKLQRIALGVAKGLEYLHLGCDHRILHFDINPHNVLLDDHFTPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSFGMLLLEMVGGRKNTNVSGEEIFQVLYPEWIHNMLEGKDIHIDIDNEGDMKIAKKLAIVGLWCIQWNPVDRPSMKTVVQMLEREGDKLMVPPTPFDSTTSSSRNNNNAVVPSRHLNFELEVIPELE 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03352 607 MobiDBLite consensus disorder prediction 570 590 - -
Arst6g03352 607 Pfam Wall-associated receptor kinase galacturonan-binding 27 94 IPR025287 GO:0030247
Arst6g03352 607 Gene3D Transferase(Phosphotransferase) domain 1 367 571 - -
Arst6g03352 607 ProSiteProfiles Protein kinase domain profile. 292 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03352 607 SUPERFAMILY Protein kinase-like (PK-like) 270 563 IPR011009 -
Arst6g03352 607 PANTHER RUST RESISTANCE KINASE LR10-RELATED 263 582 IPR045874 GO:0004672
Arst6g03352 607 Pfam Protein kinase domain 295 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03352 607 FunFam serine/threonine-protein kinase PBS1-like 260 366 - -
Arst6g03352 607 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Arst6g03352 607 MobiDBLite consensus disorder prediction 574 590 - -
Arst6g03352 607 FunFam PR5-like receptor kinase 367 573 - -
Arst6g03352 607 Gene3D Phosphorylase Kinase; domain 1 265 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03352 Arst-Chr6 101080891 101083862 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03352 4 575 Receptor kinase-like Gene Family AT1G66910 34.639 5.43e-103 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst6g03352 Pkinase 6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03352 - - gmx:100819302 834.713