Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03349 ATGCAAACCCAAGCATCATTCCCCTGCTCTTTAATCACACAAAAAATTGTATCACTCCTTTTCACAATCCTCCTCCTTTTCGAACAACCATCCACCGCCAAGAAGCACCACTCGCCATGCCCCCCTTCTTCCTGCGGCCAAATCCGCAACATAACCAACCCATTCCGACTCAAAGGCGACCCAAGCCACTGCGGCAACAAAAGGTACGAACTCGAATGCGATAGCAACAACGCCACAGTGCTAACTCTCTTCTCAGGTAACTACCACGTGCACCACATCGATTACAAGAATTACAGCATCAAGTTGAGTGATGCGGGTCTCAGCGACAACGCTAATTGTTCATTTATCCCTCGCAATTTCTTATATGATAGCAGTTTCAAGTTCGCCGTCGGCCCCGACGATTTCGGATCGCAACCGTTCACTTTAAACAATTTCGATCCAGATACAGTAGACACTTTCGATCCATCAAGAGTAGCGTATTTTAACTGCACTGATGCAGTAACTGACGACGCTGCATATGTGAAGGTAGATATAACCGCAAGTCGTTGTAGTGCCTTGGGCTTAGGGCATGTGTATGTAATGGTGGGAGCATCGTACAGTGTGACTGAAATCAAGGTTGGGTGCAGTTTGATGGTGGCTACGCTTACGGATAAGGTTCCGGCGGAGATCGGAGAAGGGAATAACAACGTTTCTTATGAGGAGATCCGGAAGGTGGTTGGCGAAGGGTTTAGCGTCTCTTGGTTGCCGGCGGTTTGCGAGGAGAAGTGTGGAAAGAAGACAAATTGCAAGGTGGTCAATGTTTCGACTGGAGAAGTCCAATGTGACAGGCGCTATTGCCACTACGCTTACCATACAACCGATAAGTGCGGAATTGCAGAACAGGCTATCGGTTATGCTCGAGCTTATCTCAGAGGCATTGTATTTGGATTAGGAAGTAGAATAACATTCAGCACAAGAAACCTGGGCAACCCAGTTGGGCTGGAGTATTTTGACGGGGGAATATTCATTGGTAGAAATATTATACCAGTAATACTTGTAACTAGATACGTACTTGGAGTTGCAGTTCTACTTTCAGTATTGATCTACATATGGCGACGAAGACATTGGTCAATATATGGAAACATTGAACATTTTTTGCTAGACAGCAATCTAAATCCCATAAGGTATGAATACAAAGAAATCAAGAAAATGAGTGGTGGTTTCAAAGTGAAATTGGGTAAAGGTGGCTTTGGGGCTGTATACAAAGGAAAACTTCGAAGTGGTCCTGATGTAGCGATAAAGATATTGAACGAATCCAATGCTAATGGCCAAGACTTCATCAACGAAGTTGCTACAATTGGAAGAATACATCATGTTAATGTGGTACGTCTTGTTGGATATTGTGTCGAGAAGAAAAAGCGTGCCCTGGTGTATGAATTCATGCCTAATGGATCATTGGATAAATACATTTTCGCCAAGGAAGGGACTTTGCCTTTGAGTTACGAGAAGATGTATGAAATATCTCTTGGAGTGGCTCGTGGAATTGCGTATTTACATCAAGGTTGTGATATGCAAATTCTACATTTCGATATCAAGCCGCACAATATTCTTCTAGATGACAACTTCGTCCCAAAGGTGTCTGATTTTGGACTTGCAAAGCTATATCCTGTGGATGATAGCACTGTCACTTTGACTGCAGCAAGAGGAACTTTAGGCTACATGGCTCCGGAGTTGTTCTACAAAAACATTGGAGGAGTATCTTATAAGGCTGATGTCTATAGTTTTGGAATGCTTTTGATGGAAATGGCGAGTAGGAGGAAGAATTCAAATCCTAATGCCGATGAATCAAGCCAAATTTACTTCCCATTTTGGATACATGATCAGCTTTATGAAGAGAGAGAGATTGAAATCGAAGATGCCTCAGAGGAGGAAAAGAGCCTAGTCAAAAAGATGTTCTTAGTTGCACTTTGGTGCATACAGCTAAAGCCTAGTGATCGTCCTTCGATGAACAAGGTAGTAGAGATGCTGGAAGGGGATAACGACGGCAGTCTTGCATTGCCTCCAAAGCCTTCTTTCTATTCACATGAAGCTTCTAGATATGTTAAGGAGGTCAATTCCAACCAAGCGTCGAGCATGGATTCCTCTGGTACTAGTTATCTTGGTGAAACCACAACTGACTATTCAATGGAGGATGATGATTAA 2181 0.4333 MQTQASFPCSLITQKIVSLLFTILLLFEQPSTAKKHHSPCPPSSCGQIRNITNPFRLKGDPSHCGNKRYELECDSNNATVLTLFSGNYHVHHIDYKNYSIKLSDAGLSDNANCSFIPRNFLYDSSFKFAVGPDDFGSQPFTLNNFDPDTVDTFDPSRVAYFNCTDAVTDDAAYVKVDITASRCSALGLGHVYVMVGASYSVTEIKVGCSLMVATLTDKVPAEIGEGNNNVSYEEIRKVVGEGFSVSWLPAVCEEKCGKKTNCKVVNVSTGEVQCDRRYCHYAYHTTDKCGIAEQAIGYARAYLRGIVFGLGSRITFSTRNLGNPVGLEYFDGGIFIGRNIIPVILVTRYVLGVAVLLSVLIYIWRRRHWSIYGNIEHFLLDSNLNPIRYEYKEIKKMSGGFKVKLGKGGFGAVYKGKLRSGPDVAIKILNESNANGQDFINEVATIGRIHHVNVVRLVGYCVEKKKRALVYEFMPNGSLDKYIFAKEGTLPLSYEKMYEISLGVARGIAYLHQGCDMQILHFDIKPHNILLDDNFVPKVSDFGLAKLYPVDDSTVTLTAARGTLGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASRRKNSNPNADESSQIYFPFWIHDQLYEEREIEIEDASEEEKSLVKKMFLVALWCIQLKPSDRPSMNKVVEMLEGDNDGSLALPPKPSFYSHEASRYVKEVNSNQASSMDSSGTSYLGETTTDYSMEDDD 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03349 726 MobiDBLite consensus disorder prediction 697 718 - -
Arst6g03349 726 CDD STKc_IRAK 405 671 - -
Arst6g03349 726 FunFam serine/threonine-protein kinase PBS1-like 374 473 - -
Arst6g03349 726 FunFam PR5-like receptor kinase 474 678 - -
Arst6g03349 726 MobiDBLite consensus disorder prediction 697 726 - -
Arst6g03349 726 ProSiteProfiles Protein kinase domain profile. 399 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03349 726 Pfam Wall-associated receptor kinase galacturonan-binding 40 104 IPR025287 GO:0030247
Arst6g03349 726 PANTHER RUST RESISTANCE KINASE LR10-RELATED 370 691 IPR045874 GO:0004672
Arst6g03349 726 Coils Coil 623 643 - -
Arst6g03349 726 Gene3D Transferase(Phosphotransferase) domain 1 474 677 - -
Arst6g03349 726 SUPERFAMILY Protein kinase-like (PK-like) 386 670 IPR011009 -
Arst6g03349 726 SMART serkin_6 399 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03349 726 Gene3D Phosphorylase Kinase; domain 1 380 473 - -
Arst6g03349 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Arst6g03349 726 Pfam Protein kinase domain 403 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03349 726 ProSitePatterns Protein kinases ATP-binding region signature. 405 427 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03349 Arst-Chr6 101075989 101080605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03349 338 707 Receptor kinase-like Gene Family AT4G18250 45.550 1.75e-104 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst6g03349 Pkinase 5.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03349 - - gmx:100820366 934.095