Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03341 ATGGGGAATAGTTTGGGTCAGAGGTTTGCTGACGATGTTCCTGATCCGCCAGCTGACGTTCTAGGTTCTGCACCCTATGGCGTAGCTCCTGCATTATCCTGGCGCTGTCGCTACCGATTCTCCCAAAGGGATGTCTTTCTCCAGCTCGTGCAGACATCTCGGGTCGTCGCGGGGGGGGACCTCGTGTGTTCTCGAGAGGAAGCCACGGAGGTTGCCCCCTGGGTTCGGCTCCATCCCCTGGCTCTACAGGTCCCAGCAAAAAGTCCATTTAGGCGGTCCCCACAGACGGCGCCAATGTTCGACTTGTCGAGTGCCGGACGGTTTGGGAATCGCTTTCCAAAGCTTCGTGGTCCCTGCCTGACTGCTGGGTGTAGTTTCGGGGGAGGGCAACCGACCTTCCGAGTTCTTCGAGTTGGATGGGGTGCCACCTGCAAAGACACTCTGACGTTCAAGTCAGCGATGTGTGCAGGCGGGGAACAGAGTAGGTCCCTCAAGCAGGTGGTACAGGAGCCTCAGGCATTTTCTTCTTTCAGAGAGCGGCTTTACCACTTACAGAGAACCGAAAATGAAAGGGTTTGCTTTGGTAGATCAGGCATTCATGGATGGGGACTTTTTGCACGTAGAAATATTCAAGAAGGAGAAATGGTTCTTGAATATCGTGGTGAACAAGTGAGACGTAGCATTGCGGATCTCAGGGAGGCACGCTATAGATTAGAAGGGAAAGACTGCTATCTATTTAAGATAAGTGAAGAAGTGGTAGTAGATGCCACTGATAAAGGAAATATAGCAAGGCTAATTAACCATTCTTGTATGCCAAATTGCTATGCAAGGATCATGAGTGTAGGTGATGATGAGAGCCGGATCGCACTCATTGCCAAGACTGATGTAACGGCTGGCGATGAGCTAACGTATGACTACTTGTTTGATCCTGATGAGCCAGATGAATTTAAGGTCCCTTGTTTATGCAAAGCTCCGAACTGCCGCAAGTTCATGAATTAG 999 0.5075 MGNSLGQRFADDVPDPPADVLGSAPYGVAPALSWRCRYRFSQRDVFLQLVQTSRVVAGGDLVCSREEATEVAPWVRLHPLALQVPAKSPFRRSPQTAPMFDLSSAGRFGNRFPKLRGPCLTAGCSFGGGQPTFRVLRVGWGATCKDTLTFKSAMCAGGEQSRSLKQVVQEPQAFSSFRERLYHLQRTENERVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLREARYRLEGKDCYLFKISEEVVVDATDKGNIARLINHSCMPNCYARIMSVGDDESRIALIAKTDVTAGDELTYDYLFDPDEPDEFKVPCLCKAPNCRKFMN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03341 332 ProSiteProfiles SET domain profile. 190 307 IPR001214 GO:0005515
Arst6g03341 332 SMART set_7 190 313 IPR001214 GO:0005515
Arst6g03341 332 FunFam Histone-lysine N-methyltransferase 164 332 - -
Arst6g03341 332 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 191 332 IPR044570 GO:0042800|GO:0051568
Arst6g03341 332 SUPERFAMILY SET domain 183 329 IPR046341 -
Arst6g03341 332 Pfam SET domain 201 306 IPR001214 GO:0005515
Arst6g03341 332 ProSiteProfiles Post-SET domain profile. 316 332 IPR003616 -
Arst6g03341 332 CDD SET_SETD1-like 177 328 - -
Arst6g03341 332 SMART PostSET_3 316 332 IPR003616 -
Arst6g03341 332 Gene3D SET domain 143 332 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03341 Arst-Chr6 101012945 101021377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03341 196 332 C2H2 Transcription Factor Family AT2G23740 36.774 1.26e-17 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst6g03341 SET 5.4e-19 No_clan