Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03336 ATGTATGCAGAAACTGGTCTTTTCTTCCCTTATTTGCAGAACTTCTCTCAAGAGCTTCAACAGCTTGAGGAGTATTGCATGAACCAGAAATCCATTGATTCAATGAGTGACCTTGCTCAATCTTCAGTAATGACAGAGTATGATCTGTTAGTAGAAGGAGATTTGTTCAAAGCACCGGAACCTATCATCGAAGAACCACTGATAGACGTGGATCCGATGACTGCAGCAGCCATCTCAATGATATCTTGCGGGGAAGATGTATCCTCACAGGGTCTAGAATCTCAGGACATCGACATTCTTCAGAACGATAATCAGCTCTTGAGTGAGGTGTTCTACGAGTGCAAAAAGGATCTCATAGAGAAGGCAGCTATAGAGTCACCGCTGTCTGATATATTGGAAATCAATATTCCTGCTCTGAATGTAGATGACAGTTTCACTCAGGAAAATAAACCAATTCCTGATGTGCCATTGGCCAAGAGTGTCAGTTCTAGAAGCTTGAGTGCAATGGATTGGATGAATTCTGTTGGCATGAAGCCTGCTTTTCTAGAATTCCCTGGAATTGATTTCAATGAGGTTTATGGCATGCGACGAGCATTTAGTGACGGAGATATAAAGACACTTGGTAATGGAAACATGAATGTTGCTCAATCTCCCCATGATAGGCCTTCTCTTCTTAGCAACTGCACCAGCGAGGAACGGCAAGAAAAACTCTCGAGATATAGAAACAAGAAGACAAAGAGAAATTTTGGAAGGAAGATTAAGTATGCTTGCAGGAAGGCACTCGCCGACAGCCAGCCAAGAATCCGCGGAAGGTTTGCAAAGACGGAAGAATCTGACATAAAGAGGCAATGA 852 0.4284 MYAETGLFFPYLQNFSQELQQLEEYCMNQKSIDSMSDLAQSSVMTEYDLLVEGDLFKAPEPIIEEPLIDVDPMTAAAISMISCGEDVSSQGLESQDIDILQNDNQLLSEVFYECKKDLIEKAAIESPLSDILEINIPALNVDDSFTQENKPIPDVPLAKSVSSRSLSAMDWMNSVGMKPAFLEFPGIDFNEVYGMRRAFSDGDIKTLGNGNMNVAQSPHDRPSLLSNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESDIKRQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03336 283 ProSiteProfiles CCT domain profile. 233 275 IPR010402 GO:0005515
Arst6g03336 283 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 160 276 IPR045281 GO:0009909
Arst6g03336 283 Pfam CCT motif 233 275 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03336 Arst-Chr6 100877778 100881283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03336 208 279 C2C2-CO-like Transcription Factor Family AT5G57660 40.506 4.09e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst6g03336 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03336 - - aprc:113853022 437.958