Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03328 ATGGGGGCCAAGGCAAAGAAAGCTATGAAGAAGAGTTTGAAGAAGGCTACTTCTACCAAGCCATCATCTTCTTCCATCAACAAATCAGAGGCTTCTGATTATTTGCCCTTGGAAGGTGGTCCTGCTCGCAAGCTCCCTGAACAGAAGCCTTTGGAGAGTGCCGCAACGGTGTTGTATATCGGCCGCATTCCGCATGGGTTTTATGAGGAGGAGATGCAAGGTTTTTTTGGACAATTTGGAACGGTCAAGAGATTGAGAATTGCAAGAAATAAGAAAACAGGAAAATCAAGGCATTTTGGGTTCATCGAATTTCAGTCTCCTGAGGTAGCTAAAGTTGTAGCCGAAACTATGCACAATTATCTGCTTTTCGAACACCTTCTCCAAGTCCACTTGATACCCCCTGAGGAAGTTCATCCACGATTATGGAGAGGTTTCAATTACAAGCACAAACCAATCGATTCAGTACAACTTGAACGAGGGCGACATGACAAGGAAAGAACATTGGAAGAGTACAATAAGTTGGTAGAAAAGATTGTGAAGCGTGACAATAAACGACGAAAAAGGTTGGAGGCTGCTGGCATTGATTACGAGTGCCCTGCGATTGTTGGTAACATCCATCCCGCACCGAAGAAAATAAAGTTTGAAGACTAA 651 0.4378 MGAKAKKAMKKSLKKATSTKPSSSSINKSEASDYLPLEGGPARKLPEQKPLESAATVLYIGRIPHGFYEEEMQGFFGQFGTVKRLRIARNKKTGKSRHFGFIEFQSPEVAKVVAETMHNYLLFEHLLQVHLIPPEEVHPRLWRGFNYKHKPIDSVQLERGRHDKERTLEEYNKLVEKIVKRDNKRRKRLEAAGIDYECPAIVGNIHPAPKKIKFED 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03328 216 PANTHER MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN 4 215 - -
Arst6g03328 216 MobiDBLite consensus disorder prediction 15 31 - -
Arst6g03328 216 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 58 125 IPR000504 GO:0003723
Arst6g03328 216 SMART rrm1_1 57 130 IPR000504 GO:0003723
Arst6g03328 216 CDD RRM_NIFK_like 57 130 - -
Arst6g03328 216 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 56 134 IPR000504 GO:0003723
Arst6g03328 216 SUPERFAMILY RNA-binding domain, RBD 56 198 IPR035979 GO:0003676
Arst6g03328 216 Coils Coil 161 181 - -
Arst6g03328 216 MobiDBLite consensus disorder prediction 1 46 - -
Arst6g03328 216 Gene3D - 2 138 IPR012677 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03328 56 129 Eukaryotic Initiation Factors Gene Family AT1G71770 33.784 7.00e-09 53.5