Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03324 ATGGAGTTCGGTAGGATCGGACCCACCGACCCGGGTGGCTCTTCACGCCGTTCTACCGCTCCACTCACCGGACCTTCTTCTGATTCCACTTCTTCCAGAACAAAGAAGAAGCTCATCATGATCTCCCTCCTCGCCGCAGCCTTGATTGTCGCCTCCGCGGTCTCCGCTGCTCTAATTGCCGTCACTCGCTCCCGTGCCTCGGCCGGGAACTCGCCGAACCTCCGCCGGGAACCAACGCAGGCAATCTCCAAGACCTGCAGCAAGACTCGGTTCCCCACACTTTGTATAACCTCTCTCATGGATTTCCCGGGGTCCGAAACCGCCACGGAGCAGGACCTTGTCCACATTTCCGTCAACATGACCCTCCACCATTTCAGCACCGCCTTCTACGCCTCCACGGGCATCGCCTTCGGCGACACAGACACACGACTCCGTGTCGCCTACGAAGACTGCCTCGAACTCATGGAGGACTCTATGGATTCGCTATGGCGGTCGCTAAGCTCGGTGGCCCCGTCCTTGGATTCATCATCCTTCGGCGATGAAGCCATAAGGCCCGCCGCCGTGGGTTCCACCGAGGACGTCACGACCTGGCTCAGTGCTGCGCTGACGAACCAGGACACGTGCTCGGAGGGGCTCGAGAACGCGACGGGAACACTGAAGGACCAGATGGTTAATAATTTGAAGAACCTGGCGGAACACGTGAGCAATTCTCTCGCGATATACTCGGCCGGAAGTGGCACTGGGGATTTCTCGGGGGTGCCTATACAGAACAAGAGACGGTTAATGGGAACCGGAGAGGAGGAGAACAAATCCAATAACTCGCGAGATAATGATAATAATAATAATAATAATAATACTCATTTCCCGAGATGGTTGAGCAAACGAGATAGGAGATTGCTGAGTTTGCCAGTATCGGCGATACAAGCCGATATAATAGTGTCGAAGAACGGTGATGGAACGGTGAAGACAATCGCAGAGGCGATTAAGAAGGCGCCGGAGAAAAGTAGCCATCGTTTCATCATATACGTTAAGCAAGGAAGGTATGAGGAGGATACTTTGAAAGTGGGTAGAAAGAAAACCAACATAATGTTCATAGGAGATGGAAGGGGCAAAACGGTCATCACAGGAAAGAAAAATGTTGCTGATGGCATCACCACATTCCGCACAGCATCCTTTGCTGCTAGTGGTGCCGGTTTCATTGCACGAGACATCACATTTGAAAACTACGCCGGACCACAGAAGCACCAAGCCGTGGCGCTTCGCGTAAGCGCCGACCACGCGGTGGTGTACCGGTGCAGCATCAAAGGCTACCAAGACGCATGCTATGTACACTCCAACCGCCAGTTCTTCCGAGAATGCGATATTTACGGCACCGTAGATTTCATATTTGGAAATGCTGCAGTGGTTTTCCAAAAATGTATTATGTATGCTAGAAAGCCCATGGCCCAACAAAAAAACACTATCACGGCCCAAAACAGAAAGGACCCAAATCAAAACACGGGCATATCCATCCACGATTGTCGGATACTACCCGCCCCGGATCTCGCGGCTGCCAAAGGCAGCGTTTCCACCTTTTTGGGCCGCCCATGGAAGCAATACTCAAGAACAGTGTACTTGTTGTCTTACATGGGTAATCACATAAACCCAAGTGGGTGGTTGCCGTGGAATGGGGACTTTGCATTGGACACATTGTATTATGGTGAGTACATGAATTCCGGGCCAGGTGCGGCCGTGGGTCAACGGGTCAAATGGAAGGGGTACCGGGTTATCACGTCCACAGTGGAGGCAAGTAGATTCACGGTGGCCCAATTTATCTCCGGCTCGGCGTGGCTACCATCCACCGGAGTGGCATTCTTGGCTGGGTTGTCAACTTGA 1875 0.5275 MEFGRIGPTDPGGSSRRSTAPLTGPSSDSTSSRTKKKLIMISLLAAALIVASAVSAALIAVTRSRASAGNSPNLRREPTQAISKTCSKTRFPTLCITSLMDFPGSETATEQDLVHISVNMTLHHFSTAFYASTGIAFGDTDTRLRVAYEDCLELMEDSMDSLWRSLSSVAPSLDSSSFGDEAIRPAAVGSTEDVTTWLSAALTNQDTCSEGLENATGTLKDQMVNNLKNLAEHVSNSLAIYSAGSGTGDFSGVPIQNKRRLMGTGEEENKSNNSRDNDNNNNNNNTHFPRWLSKRDRRLLSLPVSAIQADIIVSKNGDGTVKTIAEAIKKAPEKSSHRFIIYVKQGRYEEDTLKVGRKKTNIMFIGDGRGKTVITGKKNVADGITTFRTASFAASGAGFIARDITFENYAGPQKHQAVALRVSADHAVVYRCSIKGYQDACYVHSNRQFFRECDIYGTVDFIFGNAAVVFQKCIMYARKPMAQQKNTITAQNRKDPNQNTGISIHDCRILPAPDLAAAKGSVSTFLGRPWKQYSRTVYLLSYMGNHINPSGWLPWNGDFALDTLYYGEYMNSGPGAAVGQRVKWKGYRVITSTVEASRFTVAQFISGSAWLPSTGVAFLAGLST 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03324 624 Pfam Pectinesterase 310 607 IPR000070 GO:0030599|GO:0042545
Arst6g03324 624 MobiDBLite consensus disorder prediction 1 32 - -
Arst6g03324 624 MobiDBLite consensus disorder prediction 12 32 - -
Arst6g03324 624 SUPERFAMILY Pectin lyase-like 305 621 IPR011050 -
Arst6g03324 624 Gene3D - 304 622 IPR012334 -
Arst6g03324 624 CDD PMEI-like_3 86 246 - -
Arst6g03324 624 Gene3D Invertase/pectin methylesterase inhibitor family protein 79 243 IPR035513 -
Arst6g03324 624 ProSitePatterns Pectinesterase signature 2. 455 464 IPR033131 -
Arst6g03324 624 Pfam Plant invertase/pectin methylesterase inhibitor 81 240 IPR006501 GO:0004857
Arst6g03324 624 SMART PMEI_2 77 240 IPR006501 GO:0004857
Arst6g03324 624 FunFam Pectinesterase 304 622 - -
Arst6g03324 624 PANTHER PECTINESTERASE 49 612 - -
Arst6g03324 624 MobiDBLite consensus disorder prediction 262 290 - -
Arst6g03324 624 NCBIfam pectinesterase inhibitor domain 64 241 IPR006501 GO:0004857
Arst6g03324 624 MobiDBLite consensus disorder prediction 275 289 - -
Arst6g03324 624 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 80 242 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03324 Arst-Chr6 100693395 100699096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03324 1 623 Carbohydrate Esterase AT5G53370 60.224 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03324 - - gmx:106796002 889.026