Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03315 ATGGAACAAGGCATCCCAATAAAACAAACTAGACATCGTAGTGTCACCAACAAGTTTATGAAACAAAAGAAAAATTTTGATCTTGTCCATCTCAATGATCCCATTTCCAGAAAGCCTAAAGTAATTCGTATATTTCTAACTGATCAAGATGCTACTGACTCTTCCGGTGACGAAGAAGAAGAGTTCTTCCCTCGCCAAAGGGTGAGGCATTACATCAACCAAATTAATATTCACCCACCCTGCGAAACCGTTACCAATTCCCGAAAGAGGCTTGCCGGAATATCCTCCCCTTCATGCCGGCGACCAGTGAAGACCACTGTGGCCGCCGCCACCACCCCAACCACAACCACTACCAATAACAACAACAATGGCAGAAAGTACCGTGGTGTAAGACAAAGGCCATGGGGTAAATGGGCGGCGGAGATTCGAGATCCAAACCGGCACATCCGAGTTTGGCTGGGAACTTTTGACACTGCCGAAGAAGCTGCCAGGGAGTATGATAACGCCGCGATCAAGTTTCGCGGTCCCAAAGCTCTAACCAACTTTCCGATATCACCACCATCACAAGAAAAGAATGTAGACATCTACGACTCATCATGCGAAGATGAGTGCCTCGTCAACATGTCTTCATCACCTACTTCGGTTCTCCATTCCACAAGTCCCAAAACAGGAAAACCACAGAAGCACCACAAAGAAAACGATGGGGAGTGTGAGGGGGAGACGAGTTTCTTTGATGATGAGACGTTGGGGAATGACATGTTTAACTTTGCAACTTTGCATGATGAGTGTGTGGCTACAATGTTTGATGATGAAACTACTTCTGCACGGGTCTTTGTTAGTGAAAGTTTCAAGTTTGGTGACCACATTGAGCTTGGTAATGCAAGTTTGTACCAGGTTGACGATTATTTTGAAGAAATTTTGCTAGGCTCGGATCCTCTTGTGGTGCTGTGA 951 0.4564 MEQGIPIKQTRHRSVTNKFMKQKKNFDLVHLNDPISRKPKVIRIFLTDQDATDSSGDEEEEFFPRQRVRHYINQINIHPPCETVTNSRKRLAGISSPSCRRPVKTTVAAATTPTTTTTNNNNNGRKYRGVRQRPWGKWAAEIRDPNRHIRVWLGTFDTAEEAAREYDNAAIKFRGPKALTNFPISPPSQEKNVDIYDSSCEDECLVNMSSSPTSVLHSTSPKTGKPQKHHKENDGECEGETSFFDDETLGNDMFNFATLHDECVATMFDDETTSARVFVSESFKFGDHIELGNASLYQVDDYFEEILLGSDPLVVL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03315 316 Gene3D AP2/ERF domain 125 185 IPR036955 GO:0003700|GO:0006355
Arst6g03315 316 CDD AP2 126 185 IPR001471 GO:0003700|GO:0006355
Arst6g03315 316 PRINTS Ethylene responsive element binding protein signature 127 138 IPR001471 GO:0003700|GO:0006355
Arst6g03315 316 PRINTS Ethylene responsive element binding protein signature 149 165 IPR001471 GO:0003700|GO:0006355
Arst6g03315 316 FunFam Ethylene-responsive transcription factor 2 125 184 - -
Arst6g03315 316 ProSiteProfiles AP2/ERF domain profile. 126 183 IPR001471 GO:0003700|GO:0006355
Arst6g03315 316 SMART rav1_2 126 189 IPR001471 GO:0003700|GO:0006355
Arst6g03315 316 MobiDBLite consensus disorder prediction 113 132 - -
Arst6g03315 316 MobiDBLite consensus disorder prediction 113 127 - -
Arst6g03315 316 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 38 229 - -
Arst6g03315 316 SUPERFAMILY DNA-binding domain 126 185 IPR016177 GO:0003677
Arst6g03315 316 MobiDBLite consensus disorder prediction 210 238 - -
Arst6g03315 316 Pfam AP2 domain 126 175 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03315 Arst-Chr6 100619657 100620607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03315 6 217 AP2-EREBP Transcription Factor Family AT4G27950 43.498 1.20e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst6g03315 AP2 1.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03315 - - adu:107494931 623.624